RNA–Protein interactions for RNA: ENST00000477888.1

SPTLC1-205, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 359 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-205ENST00000477888 SLC44A2Q8IWA5 706 aaPredicted RBP6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 ZNF786Q8N393 782 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 TXLNBQ8N3L3 684 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 CEP112Q8N8E3 955 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 TRIM58Q8NG06 486 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 CPNE4Q96A23 557 aaPredicted RBP6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 ZBTB8AQ96BR9 441 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 ERP27Q96DN0 273 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 CERS2Q96G23 380 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 REXO5Q96IC2 774 aaKnown RBP6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 KLHL15Q96M94 604 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 MUS81Q96NY9 551 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 CDK15Q96Q40 435 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 SLC6A7Q99884 636 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 C1QTNF6Q9BXI9 259 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 DERL2Q9GZP9 239 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 TMEM185BQ9H7F4 350 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 CXorf36Q9H7Y0 433 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 FKRPQ9H9S5 495 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 ACSS1Q9NUB1 689 aaPredicted RBP6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 DDX28Q9NUL7 540 aaKnown RBP6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 FAM120CQ9NX05 1096 aaKnown RBP6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 PGPEP1Q9NXJ5 209 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 NTMQ9P121 344 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 ZKSCAN5Q9Y2L8 839 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 GRIP1Q9Y3R0 1128 aa6.39□□□□□ -1.39
SPTLC1-205ENST00000477888 EXPH5Q8NEV8 1989 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 LOC105371242A0A075B767 164 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 A0A087WZY1 265 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 GOLGA6L10A0A0M3HER8 536 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 A0A1W2PRB8 838 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 C1orf226A1L170 272 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 ATP6V1G2-DDX39BF2Z307 99 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 FOXE1O00358 373 aaPredicted RBP6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 EFNA2O43921 213 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 GMFGO60234 142 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 ERAL1O75616 437 aaKnown RBP6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 RAD51DO75771 328 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 IL33O95760 270 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 ANGPTL1O95841 491 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 KLK1P06870 262 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 ENPP1P22413 925 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 IDH3GP51553 393 aaPredicted RBP6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 SNRPD2P62316 118 aaKnown RBP6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 PRR5P85299 388 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 CYP27C1Q4G0S4 372 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 SPANXN3Q5MJ09 141 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 LIPJQ5W064 366 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 FAHD2BQ6P2I3 314 aaPredicted RBP6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 SLC46A3Q7Z3Q1 461 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 TRABD2AQ86V40 505 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 ZC3HC1Q86WB0 502 aaKnown RBP6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 IGDCC3Q8IVU1 814 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 LILRA2Q8N149 483 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 SLC43A2Q8N370 569 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 NAT8LQ8N9F0 302 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 WDR31Q8NA23 367 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 POC1BQ8TC44 478 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 ZNF675Q8TD23 568 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 EPS8L3Q8TE67 593 aaKnown RBP6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 TRPC4APQ8TEL6 797 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 ZNF75CPQ92670 426 aaPredicted RBP6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 FAHD2AQ96GK7 314 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 RNF145Q96MT1 663 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 LRRC37BQ96QE4 947 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 PSD2Q9BQI7 771 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 C1QTNF5Q9BXJ0 243 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 PLK3Q9H4B4 646 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 TIGARQ9NQ88 270 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 MED17Q9NVC6 651 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 CD274Q9NZQ7 290 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 ADAM29Q9UKF5 820 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 OR10H1Q9Y4A9 318 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 PCDHB14Q9Y5E9 798 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 PSAT1Q9Y617 370 aa6.38□□□□□ -1.39
SPTLC1-205ENST00000477888 FAM95CA0A1B0GW59 222 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 B9A039 149 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 C9JVG2 144 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 RGS14O43566 566 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 SEMA3DO95025 777 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 BCL10O95999 233 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 KRT14P02533 472 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 VSIG8P0DPA2 414 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 IFNGR1P15260 489 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 CD1DP15813 335 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 ME2P23368 584 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 PRTN3P24158 256 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 GCH1P30793 250 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 CLK3P49761 638 aaKnown RBP6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 PPOXP50336 477 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 IL13RA1P78552 427 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 MLC1Q15049 377 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 EFNB3Q15768 340 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 PLPPR5Q32ZL2 321 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 TCHHL1Q5QJ38 904 aaPredicted RBP6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 SH2D4BQ5SQS7 431 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 CCNYL2Q5T2Q4 361 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 FBXW9Q5XUX1 488 aa6.37□□□□□ -1.39
SPTLC1-205ENST00000477888 CAVIN1Q6NZI2 390 aaKnown RBP6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms