RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 IL33O95760 270 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 IGKV3-11P04433 115 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 CFIP05156 583 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 GP1BAP07359 652 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 CTSBP07858 339 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 HTR1AP08908 422 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 CD63P08962 238 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 CT45A8P0DMV1 189 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 CT45A9P0DMV2 189 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 POU2F1P14859 743 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 HPGDP15428 266 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 MAOAP21397 527 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 ACVR2AP27037 513 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 POU1F1P28069 291 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 SSTR4P31391 388 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 SLC15A1P46059 708 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 SLC6A8P48029 635 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 GPR143P51810 404 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 CTBP2P56545 445 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 SLC37A1P57057 533 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 COPZ1P61923 177 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 BTG2P78543 158 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 RHAGQ02094 409 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 OCA2Q04671 838 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 PRKCDQ05655 676 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 TMED1Q13445 227 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 OR1Q1Q15612 314 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 TIMM50Q3ZCQ8 353 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 KLHL22Q53GT1 634 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 CT45A2Q5DJT8 189 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 ARMC4Q5T2S8 1044 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 CCNJQ5T5M9 372 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 MFSD4BQ5TF39 518 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 GPR107Q5VW38 600 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 HLA-DQA1Q5Y7H0 255 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 ULK3Q6PHR2 472 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 FIGNL1Q6PIW4 674 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 AHSA2Q719I0 299 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 ZNF367Q7RTV3 350 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 COMTD1Q86VU5 262 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 MAML2Q8IZL2 1156 aaPredicted RBP7.34□□□□□ -1.23
VMA21-203ENST00000477649 RCBTB1Q8NDN9 531 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 OR52L1Q8NGH7 329 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 BRIX1Q8TDN6 353 aaKnown RBP7.34□□□□□ -1.23
VMA21-203ENST00000477649 PTPMT1Q8WUK0 201 aaPredicted RBP7.34□□□□□ -1.23
VMA21-203ENST00000477649 FAR1Q8WVX9 515 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 TMEM239Q8WW34 195 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 GGHQ92820 318 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 TP53INP1Q96A56 240 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 TMIGD2Q96BF3 282 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 C12orf43Q96C57 262 aaKnown RBP7.34□□□□□ -1.23
VMA21-203ENST00000477649 HSPBAP1Q96EW2 488 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 LCORQ96JN0 433 aaPredicted RBP7.34□□□□□ -1.23
VMA21-203ENST00000477649 LRFN5Q96NI6 719 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 YIPF2Q9BWQ6 316 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 ITPAQ9BY32 194 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 LHPPQ9H008 270 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 FN3KQ9H479 309 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 C12orf10Q9HB07 376 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 MRPS18AQ9NVS2 196 aaKnown RBP7.34□□□□□ -1.23
VMA21-203ENST00000477649 PAK1IP1Q9NWT1 392 aaPredicted RBP7.34□□□□□ -1.23
VMA21-203ENST00000477649 ERVK-18Q9QC07 812 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 RPS6KB2Q9UBS0 482 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 WARS2Q9UGM6 360 aaKnown RBP7.34□□□□□ -1.23
VMA21-203ENST00000477649 NXT1Q9UKK6 140 aaKnown RBP7.34□□□□□ -1.23
VMA21-203ENST00000477649 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP7.34□□□□□ -1.23
VMA21-203ENST00000477649 MED31Q9Y3C7 131 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 PCDHGB6Q9Y5F9 930 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 CDH10Q9Y6N8 788 aa7.34□□□□□ -1.23
VMA21-203ENST00000477649 A0A0B4J2E0 115 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 A0A1B0GX12 115 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 A0A1W2PQD3 144 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 GXYLT2A0PJZ3 443 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 CPED1A4D0V7 1026 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 TMEM221A6NGB7 291 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 SERINC4A6NH21 518 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 TMX2-CTNND1H3BSU7 103 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 TGFBR3LH3BV60 316 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 M0R296 226 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 SCDO00767 359 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 PRODHO43272 600 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 HCN1O60741 890 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 CDC123O75794 336 aaPredicted RBP7.33□□□□□ -1.24
VMA21-203ENST00000477649 GABARAPO95166 117 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 CSTAP01040 98 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 MT-ND2P03891 347 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 RPLP0P05388 317 aaKnown RBP7.33□□□□□ -1.24
VMA21-203ENST00000477649 PNMTP11086 282 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 BMP7P18075 431 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 PAX7P23759 505 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 SLC5A2P31639 672 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 CAPZA2P47755 286 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 SMCPP49901 116 aaPredicted RBP7.33□□□□□ -1.24
VMA21-203ENST00000477649 PGDP52209 483 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 DCDP81605 110 aaKnown RBP7.33□□□□□ -1.24
VMA21-203ENST00000477649 DAB2P98082 770 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 EFNB1P98172 346 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 RAB40BQ12829 278 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 IRF3Q14653 427 aa7.33□□□□□ -1.24
VMA21-203ENST00000477649 GINS1Q14691 196 aa7.33□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 54.7 ms