RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 A0A1W2PQD3 144 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 A1L4Q6 167 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 SCDO00767 359 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 BCKDKO14874 412 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 BCAS1O75363 584 aaPredicted RBP8.79□□□□□ -1
HDAC3-208ENST00000476739 STX11O75558 287 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 KRT75O95678 551 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 CLDN1O95832 211 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 CHRM4P08173 479 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 NUDT7P0C024 238 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 ESRRAP11474 423 aaPredicted RBP8.79□□□□□ -1
HDAC3-208ENST00000476739 ETFAP13804 333 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 HPGDP15428 266 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 LCN1P31025 176 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 ATP12AP54707 1039 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 CASP6P55212 293 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 GFRA1P56159 465 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 DSCR4P56555 118 aaPredicted RBP8.79□□□□□ -1
HDAC3-208ENST00000476739 PLAURQ03405 335 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 ZNF117Q03924 483 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 CHRNEQ04844 493 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 NHSL2Q5HYW2 709 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 PDZK1Q5T2W1 519 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 METTL21CQ5VZV1 264 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 VASNQ6EMK4 673 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 CBLN3Q6UW01 205 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 PLXDC2Q6UX71 529 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 C16orf62Q7Z3J2 963 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 ZNF614Q8N883 585 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 RNF217Q8TC41 542 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 ITLN2Q8WWU7 325 aaPredicted RBP8.79□□□□□ -1
HDAC3-208ENST00000476739 ABTB1Q969K4 478 aaPredicted RBP8.79□□□□□ -1
HDAC3-208ENST00000476739 C1GALT1C1Q96EU7 318 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 WDYHV1Q96HA8 205 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 SH3YL1Q96HL8 342 aaPredicted RBP8.79□□□□□ -1
HDAC3-208ENST00000476739 PSMG3-AS1Q96PY0 264 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 TRIM8Q9BZR9 551 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 IKZF5Q9H5V7 419 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 SDHAF3Q9NRP4 125 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 EXD2Q9NVH0 621 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 ALKBH4Q9NXW9 302 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 KLHL14Q9P2G3 628 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 DKKL1Q9UK85 242 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 TRIM33Q9UPN9 1127 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 DTNAQ9Y4J8 743 aa8.79□□□□□ -1
HDAC3-208ENST00000476739 HEATR5AQ86XA9 2040 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 ICE1Q9Y2F5 2266 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 CLDN24A6NM45 220 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 E9PLN8 166 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 CLIC1O00299 241 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 FBP2O00757 339 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 KIAA0513O60268 411 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 SHOX2O60902 331 aaPredicted RBP8.78□□□□□ -1
HDAC3-208ENST00000476739 SOX30O94993 753 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 H6PDO95479 791 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 AK1P00568 194 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 HK1P19367 917 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 CRATP43155 626 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 NUP107P57740 925 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 TOMM34Q15785 309 aaPredicted RBP8.78□□□□□ -1
HDAC3-208ENST00000476739 ZNF141Q15928 474 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 GPAT3Q53EU6 434 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 LRIF1Q5T3J3 769 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 WLSQ5T9L3 541 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 HIST2H2BCQ6DN03 193 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 DLEU7Q6UYE1 221 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 SEM1Q6ZVN7 128 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 IFNEQ86WN2 208 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 POC1BQ8TC44 478 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 PHOSPHO1Q8TCT1 267 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 SFXN2Q96NB2 322 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 VKORC1Q9BQB6 163 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 NMUR2Q9GZQ4 415 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 PRDM14Q9GZV8 571 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 HOXD1Q9GZZ0 328 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 SAP130Q9H0E3 1048 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 SLC38A1Q9H2H9 487 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 TP63Q9H3D4 680 aaPredicted RBP8.78□□□□□ -1
HDAC3-208ENST00000476739 RABEP2Q9H5N1 569 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 SAR1AQ9NR31 198 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 TMEM45AQ9NWC5 275 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 ICAM5Q9UMF0 924 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 VDAC3Q9Y277 283 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 CARD8Q9Y2G2 431 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 MRPS18CQ9Y3D5 142 aaKnown RBP8.78□□□□□ -1
HDAC3-208ENST00000476739 WDR45Q9Y484 360 aa8.78□□□□□ -1
HDAC3-208ENST00000476739 PHF3Q92576 2039 aaKnown RBP8.78□□□□□ -1
HDAC3-208ENST00000476739 SERINC4A6NH21 518 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 H0YC42 278 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 HCRTR2O43614 444 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 AGR2O95994 175 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 TFPTP0C1Z6 253 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 ACVR2AP27037 513 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 LHX2P50458 406 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 SUCLG1P53597 346 aaKnown RBP8.77□□□□□ -1.01
HDAC3-208ENST00000476739 TPD52P55327 224 aaPredicted RBP8.77□□□□□ -1.01
HDAC3-208ENST00000476739 CLDN15P56746 228 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 CLDN18P56856 261 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 DSTNP60981 165 aa8.77□□□□□ -1.01
HDAC3-208ENST00000476739 SRYQ05066 204 aa8.77□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms