RNA–Protein interactions for RNA: ENST00000475993.1

ABCF1-205, Transcript of ATP binding cassette subfamily F member 1, humanhuman

TSL 1 (best)

Gene ABCF1, Length 2,860 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-205ENST00000475993 CBSP35520 551 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 CD96P40200 585 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 GPR143P51810 404 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 SEC61A1P61619 476 aaKnown RBP9.89□□□□□ -0.83
ABCF1-205ENST00000475993 SIM1P81133 766 aaPredicted RBP9.89□□□□□ -0.83
ABCF1-205ENST00000475993 NDUFA9Q16795 377 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 ATP13A5Q4VNC0 1218 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 LIPJQ5W064 366 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 FAM109BQ6ICB4 259 aaPredicted RBP9.89□□□□□ -0.83
ABCF1-205ENST00000475993 SFXN4Q6P4A7 337 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 MRGPREQ86SM8 312 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 OR14A16Q8NHC5 309 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 ADAT1Q9BUB4 502 aaKnown RBP9.89□□□□□ -0.83
ABCF1-205ENST00000475993 SLC12A9Q9BXP2 914 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 TMEM121BQ9BXQ6 578 aaPredicted RBP9.89□□□□□ -0.83
ABCF1-205ENST00000475993 SEBOXQ9HB31 216 aaPredicted RBP9.89□□□□□ -0.83
ABCF1-205ENST00000475993 NANSQ9NR45 359 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 MED11Q9P086 117 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 PIM2Q9P1W9 311 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 PISDQ9UG56 409 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 FLVCR2Q9UPI3 526 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 TRBV5-4A0A0C4DH59 114 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 TMEM200CA6NKL6 621 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 HMSDA8MTL9 139 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 KDM4EB2RXH2 506 aaPredicted RBP9.89□□□□□ -0.83
ABCF1-205ENST00000475993 HOXA2O43364 376 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 NME6O75414 186 aaPredicted RBP9.89□□□□□ -0.83
ABCF1-205ENST00000475993 AKR7A3O95154 331 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 ETHE1O95571 254 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 TBX18O95935 607 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 EPHX1P07099 455 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 PRKAR2AP13861 404 aaKnown RBP9.89□□□□□ -0.83
ABCF1-205ENST00000475993 MMP11P24347 488 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 SLC6A11P48066 632 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 UPP1Q16831 310 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 AADACL4Q5VUY2 407 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 REEP3Q6NUK4 255 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 SMARCD3Q6STE5 483 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 UBE2R2Q712K3 238 aaPredicted RBP9.89□□□□□ -0.83
ABCF1-205ENST00000475993 CPXM2Q8N436 756 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 FAM98AQ8NCA5 519 aaKnown RBP9.89□□□□□ -0.83
ABCF1-205ENST00000475993 RNASE11Q8TAA1 199 aaKnown RBP9.89□□□□□ -0.83
ABCF1-205ENST00000475993 GNPDA2Q8TDQ7 276 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 DTD1Q8TEA8 209 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 SPRYD4Q8WW59 207 aaPredicted RBP9.89□□□□□ -0.83
ABCF1-205ENST00000475993 DNAJB3Q8WWF6 145 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 THAP4Q8WY91 577 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 SOX7Q9BT81 388 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 LINC00597Q9H2U6 94 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 ASB8Q9H765 288 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 DDX31Q9H8H2 851 aaKnown RBP9.89□□□□□ -0.83
ABCF1-205ENST00000475993 SLC6A20Q9NP91 592 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 NKIRAS2Q9NYR9 191 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 TREM2Q9NZC2 230 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 NTMQ9P121 344 aa9.89□□□□□ -0.83
ABCF1-205ENST00000475993 A0A0G2JK05 382 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 MBLAC1A4D2B0 266 aaPredicted RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 GSTZ1O43708 216 aaPredicted RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 UGDHO60701 494 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 ALPIP09923 528 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 ADCYAP1R1P41586 468 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 GNG10P50151 68 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 SMIM11AP58511 58 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 GABREP78334 506 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 RING1Q06587 406 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 POU4F2Q12837 409 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 DDX39BQ13838 428 aaKnown RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 RNASE12Q5GAN4 147 aaKnown RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 ZNF660Q6AZW8 331 aaPredicted RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 OR5M10Q6IEU7 315 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 ZCCHC12Q6PEW1 402 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 ZC3H14Q6PJT7 736 aaKnown RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 GSG1LQ6UXU4 331 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 NAA40Q86UY6 237 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 LDLRAD3Q86YD5 345 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 HORMAD2Q8N7B1 307 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 OR10H5Q8NGA6 315 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 OR5AK3PQ8NH89 298 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 SP7Q8TDD2 431 aaPredicted RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 KAT2AQ92830 837 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 GPA33Q99795 319 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 TGIF2Q9GZN2 237 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 MTG2Q9H4K7 406 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 TEX10Q9NXF1 929 aaPredicted RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 VSX1Q9NZR4 365 aaPredicted RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 PTGFRNQ9P2B2 879 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 LHX6Q9UPM6 363 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 GPR52Q9Y2T5 361 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 DENND4AQ7Z401 1863 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 ZNF106Q9H2Y7 1883 aaKnown RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 ARHGEF33A8MVX0 844 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 DISC1C4P0D8 188 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 LRRN3E7EW58 273 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 KPNA3O00505 521 aaPredicted RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 RNF13O43567 381 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 KDELR3O43731 214 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 HYAL3O43820 417 aaPredicted RBP9.88□□□□□ -0.83
ABCF1-205ENST00000475993 IGLV3-27P01718 113 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 HIST1H2ABP04908 130 aa9.88□□□□□ -0.83
ABCF1-205ENST00000475993 MMP3P08254 477 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms