RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 ARSGQ96EG1 525 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 ZNF583Q96ND8 569 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 GNRHR2Q96P88 292 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 TREX2Q9BQ50 279 aaPredicted RBP6.37□□□□□ -1.39
LIMD1-204ENST00000474665 SLX1AQ9BQ83 275 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 FAM173AQ9BQD7 235 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 TTTY12Q9BZ98 90 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 TSPAN10Q9H1Z9 355 aaPredicted RBP6.37□□□□□ -1.39
LIMD1-204ENST00000474665 UBQLN3Q9H347 655 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 GSX1Q9H4S2 264 aaPredicted RBP6.37□□□□□ -1.39
LIMD1-204ENST00000474665 A4GALTQ9NPC4 353 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 ASF1BQ9NVP2 202 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.37□□□□□ -1.39
LIMD1-204ENST00000474665 FBXL2Q9UKC9 423 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 ABCG2Q9UNQ0 655 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 KLF13Q9Y2Y9 288 aaPredicted RBP6.37□□□□□ -1.39
LIMD1-204ENST00000474665 SEC23IPQ9Y6Y8 1000 aaKnown RBP6.37□□□□□ -1.39
LIMD1-204ENST00000474665 KIAA1549Q9HCM3 1950 aa6.37□□□□□ -1.39
LIMD1-204ENST00000474665 PKDREJQ9NTG1 2253 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 IGLV3-32A0A0A0MS00 114 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 AGAP5A6NIR3 686 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 KIAA1324LA8MWY0 1029 aaPredicted RBP6.36□□□□□ -1.39
LIMD1-204ENST00000474665 GNB5O14775 395 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 SNPHO15079 494 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 ZNHIT1O43257 154 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 SCO2O43819 266 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 STX11O75558 287 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 UGT2B17O75795 530 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 SOX30O94993 753 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 EPPINO95925 133 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 NPPAP01160 153 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 P04436 131 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 CD99P14209 185 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 LCN1P31025 176 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 NUDT2P50583 147 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 ATP12AP54707 1039 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 PCBP3P57721 371 aaKnown RBP6.36□□□□□ -1.39
LIMD1-204ENST00000474665 TXNL4AP83876 142 aaKnown RBP6.36□□□□□ -1.39
LIMD1-204ENST00000474665 SNTA1Q13424 505 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 GPR68Q15743 365 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 NDUFAF6Q330K2 333 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 MMEL1Q495T6 779 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 FLYWCH1Q4VC44 716 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 CMPK2Q5EBM0 449 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 PDZK1Q5T2W1 519 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 GCNT6Q5T4J0 391 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 TIGD3Q6B0B8 471 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 OR5M10Q6IEU7 315 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 SLC30A6Q6NXT4 461 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 CBLN3Q6UW01 205 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 C6orf89Q6UWU4 347 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 LRRC74BQ6ZQY2 392 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 C16orf62Q7Z3J2 963 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 FGD2Q7Z6J4 655 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 TMEM251Q8N6I4 163 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 FADS6Q8N9I5 356 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 TMEM178AQ8NBL3 297 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 FAM71CQ8NEG0 241 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 OR8J3Q8NGG0 315 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 OR10A6Q8NH74 314 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 DUSP19Q8WTR2 217 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 FAR1Q8WVX9 515 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 TMCO6Q96DC7 493 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 CMTM5Q96DZ9 223 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 TMEM19Q96HH6 336 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 TMEM41AQ96HV5 264 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 NPAS1Q99742 590 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 WFDC6Q9BQY6 131 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 DOHHQ9BU89 302 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 OSBPL11Q9BXB4 747 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 PIF1Q9H611 641 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 TMEM38AQ9H6F2 299 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 ZNF703Q9H7S9 590 aaPredicted RBP6.36□□□□□ -1.39
LIMD1-204ENST00000474665 METTL7AQ9H8H3 244 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 ZDHHC11Q9H8X9 412 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 EFCAB1Q9HAE3 211 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 BCL2L10Q9HD36 194 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 ZFP64Q9NPA5 681 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 UBQLN4Q9NRR5 601 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 PLSCR2Q9NRY7 297 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 ABCD2Q9UBJ2 740 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 TAGLN3Q9UI15 199 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 LIPT1Q9Y234 373 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 WIF1Q9Y5W5 379 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 LIPGQ9Y5X9 500 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 NBEAL1Q6ZS30 2694 aa6.36□□□□□ -1.39
LIMD1-204ENST00000474665 PHF3Q92576 2039 aaKnown RBP6.35□□□□□ -1.39
LIMD1-204ENST00000474665 FAM166BA8MTA8 275 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 KLRC4-KLRK1H3BQV0 150 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 HS6ST1O60243 411 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 ZIC3O60481 467 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 TPST1O60507 370 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 DNAJA2O60884 412 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 UBOX5O94941 541 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 SNX4O95219 450 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 RASAL1O95294 804 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 PGM3O95394 542 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 ANGPTL1O95841 491 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 AGR2O95994 175 aa6.35□□□□□ -1.39
LIMD1-204ENST00000474665 AK1P00568 194 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms