RNA–Protein interactions for RNA: ENST00000474597.5

SSR1-204, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 5 BASIC

Gene SSR1, Length 1,808 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-204ENST00000474597 MMP11P24347 488 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 CHMP24386 653 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 HTR2AP28223 471 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 IDH2P48735 452 aaKnown RBP18.26■□□□□ 0.51
SSR1-204ENST00000474597 NR1H2P55055 460 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 RAB15P59190 212 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 TUBA4AP68366 448 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 DCAF12Q5T6F0 453 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 MRPL14Q6P1L8 145 aaKnown RBP18.26■□□□□ 0.51
SSR1-204ENST00000474597 C1orf94Q6P1W5 598 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 NKAIN4Q8IVV8 208 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 PRR22Q8IZ63 422 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 DEPDC4Q8N2C3 294 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 B3GNT7Q8NFL0 401 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 OR4C3Q8NH37 302 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 GNPDA2Q8TDQ7 276 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 LPAR4Q99677 370 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 NRSN2Q9GZP1 204 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 WDR54Q9H977 334 aa18.26■□□□□ 0.51
SSR1-204ENST00000474597 DNAJB12Q9NXW2 375 aaKnown RBP18.26■□□□□ 0.51
SSR1-204ENST00000474597 SPEGQ15772 3267 aa18.25■□□□□ 0.51
SSR1-204ENST00000474597 C4orf47A7E2U8 309 aa18.25■□□□□ 0.51
SSR1-204ENST00000474597 E9PQ18 207 aa18.25■□□□□ 0.51
SSR1-204ENST00000474597 SCDO00767 359 aa18.25■□□□□ 0.51
SSR1-204ENST00000474597 ITIH1P19827 911 aa18.25■□□□□ 0.51
SSR1-204ENST00000474597 GSTM3P21266 225 aa18.25■□□□□ 0.51
SSR1-204ENST00000474597 HLCSP50747 726 aa18.25■□□□□ 0.51
SSR1-204ENST00000474597 MAD2L1BPQ15013 274 aaPredicted RBP18.25■□□□□ 0.51
SSR1-204ENST00000474597 PTGES3Q15185 160 aaKnown RBP18.25■□□□□ 0.51
SSR1-204ENST00000474597 PAPD4Q6PIY7 484 aaKnown RBP18.25■□□□□ 0.51
SSR1-204ENST00000474597 CPEB2Q7Z5Q1 589 aaKnown RBP18.25■□□□□ 0.51
SSR1-204ENST00000474597 ZER1Q7Z7L7 766 aa18.25■□□□□ 0.51
SSR1-204ENST00000474597 FBLIM1Q8WUP2 373 aa18.25■□□□□ 0.51
SSR1-204ENST00000474597 OIT3Q8WWZ8 545 aa18.25■□□□□ 0.51
SSR1-204ENST00000474597 SLC35B4Q969S0 331 aa18.25■□□□□ 0.51
SSR1-204ENST00000474597 HSPBAP1Q96EW2 488 aa18.25■□□□□ 0.51
SSR1-204ENST00000474597 RASSF1Q9NS23 344 aa18.25■□□□□ 0.51
SSR1-204ENST00000474597 IMPAD1Q9NX62 359 aa18.25■□□□□ 0.51
SSR1-204ENST00000474597 SLC35A3Q9Y2D2 325 aa18.25■□□□□ 0.51
SSR1-204ENST00000474597 CDC14CA4D256 554 aa18.24■□□□□ 0.51
SSR1-204ENST00000474597 SLC1A7O00341 560 aa18.24■□□□□ 0.51
SSR1-204ENST00000474597 CNOT3O75175 753 aaKnown RBP18.24■□□□□ 0.51
SSR1-204ENST00000474597 UTS2O95399 124 aa18.24■□□□□ 0.51
SSR1-204ENST00000474597 SOX14O95416 240 aa18.24■□□□□ 0.51
SSR1-204ENST00000474597 LCN1P31025 176 aa18.24■□□□□ 0.51
SSR1-204ENST00000474597 CDC42P60953 191 aa18.24■□□□□ 0.51
SSR1-204ENST00000474597 INSM1Q01101 510 aaPredicted RBP18.24■□□□□ 0.51
SSR1-204ENST00000474597 PLCXD2Q0VAA5 305 aa18.24■□□□□ 0.51
SSR1-204ENST00000474597 FAM199XQ6PEV8 388 aaPredicted RBP18.24■□□□□ 0.51
SSR1-204ENST00000474597 HSDL2Q6YN16 418 aa18.24■□□□□ 0.51
SSR1-204ENST00000474597 BPIFB6Q8NFQ5 453 aa18.24■□□□□ 0.51
SSR1-204ENST00000474597 PMEPA1Q969W9 287 aa18.24■□□□□ 0.51
SSR1-204ENST00000474597 ADOQ96SZ5 270 aa18.24■□□□□ 0.51
SSR1-204ENST00000474597 AKIRIN1Q9H9L7 192 aaPredicted RBP18.24■□□□□ 0.51
SSR1-204ENST00000474597 POLR1BQ9H9Y6 1135 aa18.24■□□□□ 0.51
SSR1-204ENST00000474597 NCDNQ9UBB6 729 aa18.24■□□□□ 0.51
SSR1-204ENST00000474597 REV1Q9UBZ9 1251 aa18.24■□□□□ 0.51
SSR1-204ENST00000474597 DMDP11532 3685 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 TRIM64A6NGJ6 449 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 TO15178 435 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 ABCB7O75027 752 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 THY1P04216 161 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 TFAP2AP05549 437 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 CRHBPP24387 322 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 ALDH6A1Q02252 535 aaKnown RBP18.23■□□□□ 0.51
SSR1-204ENST00000474597 PLAURQ03405 335 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 KLHL26Q53HC5 615 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 ZNF613Q6PF04 617 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 CD300LDQ6UXZ3 194 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 RAB11FIP2Q7L804 512 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 PRICKLE2Q7Z3G6 844 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 P3H2Q8IVL5 708 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 ENTHD1Q8IYW4 607 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 SLC34A3Q8N130 599 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 C17orf47Q8NEP4 570 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 TMEM255BQ8WV15 326 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 TRIM2Q9C040 744 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 B3GALT1Q9Y5Z6 326 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 ZNF318Q5VUA4 2279 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 ZAR1LA6NP61 321 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 CCDC159P0C7I6 412 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 JMJD7P0C870 316 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 FMO3P31513 532 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 GPR143P51810 404 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 NRG3P56975 720 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 RNF4P78317 190 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 PSPHP78330 225 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 MBOAT2Q6ZWT7 520 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 CCDC71Q8IV32 467 aaPredicted RBP18.23■□□□□ 0.51
SSR1-204ENST00000474597 ZNF440Q8IYI8 595 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 VMP1Q96GC9 406 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 SEMA4CQ9C0C4 833 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 SCN3BQ9NY72 215 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 SELENONQ9NZV5 590 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 RPS6KB2Q9UBS0 482 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 RNF6Q9Y252 685 aa18.23■□□□□ 0.51
SSR1-204ENST00000474597 GPR179Q6PRD1 2367 aa18.22■□□□□ 0.51
SSR1-204ENST00000474597 GABARAPL2P60520 117 aa18.22■□□□□ 0.51
SSR1-204ENST00000474597 LSM11P83369 360 aaKnown RBP eCLIP18.22■□□□□ 0.51
SSR1-204ENST00000474597 CSRP2Q16527 193 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms