RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 MTPNP58546 118 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 GANABQ14697 944 aaKnown RBP11.29□□□□□ -0.6
DDX56-209ENST00000473924 GCNT6Q5T4J0 391 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 HMGN2P46Q86SG4 172 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 IFNEQ86WN2 208 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 TMCO5AQ8N6Q1 288 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 FADS6Q8N9I5 356 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 B4GALNT2Q8NHY0 566 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 SLC38A5Q8WUX1 472 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 OIT3Q8WWZ8 545 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 MAL2Q969L2 176 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 SARAFQ96BY9 339 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 LRRC58Q96CX6 371 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 RCN3Q96D15 328 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 CMTM5Q96DZ9 223 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 TMEM19Q96HH6 336 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 LRRC37BQ96QE4 947 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 SH3GL1Q99961 368 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 CPPED1Q9BRF8 314 aaPredicted RBP11.29□□□□□ -0.6
DDX56-209ENST00000473924 QRSL1Q9H0R6 528 aaKnown RBP11.29□□□□□ -0.6
DDX56-209ENST00000473924 MYLK2Q9H1R3 596 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 SLC38A1Q9H2H9 487 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 MTHFD2LQ9H903 347 aaPredicted RBP11.29□□□□□ -0.6
DDX56-209ENST00000473924 A4GALTQ9NPC4 353 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 CARD8Q9Y2G2 431 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 RPH3AQ9Y2J0 694 aaPredicted RBP11.29□□□□□ -0.6
DDX56-209ENST00000473924 SLC6A5Q9Y345 797 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 GMEB1Q9Y692 573 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 NBASA2RRP1 2371 aa11.29□□□□□ -0.6
DDX56-209ENST00000473924 RP1L1Q8IWN7 2480 aaPredicted RBP11.28□□□□□ -0.6
DDX56-209ENST00000473924 IGLV3-32A0A0A0MS00 114 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 A0A1B0GVC2 190 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 OR14I1A6ND48 311 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 AIM2O14862 343 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 BCKDKO14874 412 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 ZNF264O43296 627 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 CYP7B1O75881 506 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 CSTAP01040 98 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 BMP2P12643 396 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 IL7RP16871 459 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 CCR4P51679 360 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 ZNF41P51814 821 aaPredicted RBP11.28□□□□□ -0.6
DDX56-209ENST00000473924 ZNF117Q03924 483 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 CYP51A1Q16850 503 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 RPS26P11Q5JNZ5 115 aaPredicted RBP11.28□□□□□ -0.6
DDX56-209ENST00000473924 WLSQ5T9L3 541 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 C1QL3Q5VWW1 255 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 RAET1LQ5VY80 246 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 NANOGP8Q6NSW7 305 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 EIF3MQ7L2H7 374 aaKnown RBP11.28□□□□□ -0.6
DDX56-209ENST00000473924 FGD2Q7Z6J4 655 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 CD163Q86VB7 1156 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 TREML1Q86YW5 311 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 PEX5LQ8IYB4 626 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 FAM57AQ8TBR7 257 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 PMM1Q92871 262 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 ZG16BQ96DA0 208 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 C1GALT1C1Q96EU7 318 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 SFXN2Q96NB2 322 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 SLC39A3Q9BRY0 314 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 TRIM8Q9BZR9 551 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 OR2B2Q9GZK3 357 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 IKZF5Q9H5V7 419 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 RUBCNLQ9H714 662 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 NANOGQ9H9S0 305 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 ST6GALNAC1Q9NSC7 600 aaPredicted RBP11.28□□□□□ -0.6
DDX56-209ENST00000473924 TNFRSF10DQ9UBN6 386 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 SUCOQ9UBS9 1254 aaKnown RBP11.28□□□□□ -0.6
DDX56-209ENST00000473924 KCNE5Q9UJ90 142 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 VDAC3Q9Y277 283 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 SLC35A3Q9Y2D2 325 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 ZNF835Q9Y2P0 537 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 MRPS18CQ9Y3D5 142 aaKnown RBP11.28□□□□□ -0.6
DDX56-209ENST00000473924 L3MBTL1Q9Y468 752 aa11.28□□□□□ -0.6
DDX56-209ENST00000473924 ZGRF1Q86YA3 2104 aa11.27□□□□□ -0.6
DDX56-209ENST00000473924 A0A0G2JPF8 293 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 CENPVL1A0A0U1RR11 272 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 A0A1B0GUH1 482 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 AGAP5A6NIR3 686 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 HNRNPCL2B2RXH8 293 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 B4DXG7 233 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 HNRNPCL3B7ZW38 293 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 EIF4E2O60573 245 aaKnown RBP11.27□□□□□ -0.61
DDX56-209ENST00000473924 HNRNPCL1O60812 293 aaKnown RBP11.27□□□□□ -0.61
DDX56-209ENST00000473924 DBIP07108 87 aaKnown RBP11.27□□□□□ -0.61
DDX56-209ENST00000473924 STSP08842 583 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 UBTFL6P0CB48 400 aaPredicted RBP11.27□□□□□ -0.61
DDX56-209ENST00000473924 HNRNPCL4P0DMR1 293 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 ARAFP10398 606 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 SLC6A2P23975 617 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 P2RX1P51575 399 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 KCNJ10P78508 379 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 CDK6Q00534 326 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 ART3Q13508 389 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 SCARB2Q14108 478 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 SELPLGQ14242 412 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 FGFBP1Q14512 234 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 MAPK14Q16539 360 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 C3AR1Q16581 482 aa11.27□□□□□ -0.61
DDX56-209ENST00000473924 NDUFAF6Q330K2 333 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms