RNA–Protein interactions for RNA: ENST00000473421.1

TRAF4-209, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 585 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-209ENST00000473421 UBFD1O14562 309 aaKnown RBP11.17□□□□□ -0.62
TRAF4-209ENST00000473421 ULK1O75385 1050 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 LYZL6O75951 148 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 LY6HO94772 140 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 SUPT7LO94864 414 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 LINGO3P0C6S8 592 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 ACP2P11117 423 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 HSD3B1P14060 373 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 HSD3B2P26439 372 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 PRIM2P49643 509 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 CARD18P57730 90 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 PSPHP78330 225 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 FOXF1Q12946 379 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 TOMM34Q15785 309 aaPredicted RBP11.17□□□□□ -0.62
TRAF4-209ENST00000473421 ZNF678Q5SXM1 525 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 TEX35Q5T0J7 233 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 CCNJQ5T5M9 372 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 C11orf71Q6IPW1 123 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 B3GLCTQ6Y288 498 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 ESPNLQ6ZVH7 1005 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 STK32CQ86UX6 486 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 SAMD14Q8IZD0 417 aaPredicted RBP11.17□□□□□ -0.62
TRAF4-209ENST00000473421 LILRA2Q8N149 483 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 ZNF525Q8N782 197 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 BANPQ8N9N5 519 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 METTL6Q8TCB7 284 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 HOXB13Q92826 284 aaPredicted RBP11.17□□□□□ -0.62
TRAF4-209ENST00000473421 C16orf58Q96GQ5 468 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 KLHL15Q96M94 604 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 TNFRSF13CQ96RJ3 184 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 KCNK17Q96T54 332 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 MRPL57Q9BQC6 102 aaKnown RBP11.17□□□□□ -0.62
TRAF4-209ENST00000473421 CACNG6Q9BXT2 260 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 MRPL46Q9H2W6 279 aaKnown RBP11.17□□□□□ -0.62
TRAF4-209ENST00000473421 ACSS3Q9H6R3 686 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 ESRP2Q9H6T0 727 aaKnown RBP11.17□□□□□ -0.62
TRAF4-209ENST00000473421 CXorf36Q9H7Y0 433 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 MANSC1Q9H8J5 431 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 TNFRSF12AQ9NP84 129 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 GLRX2Q9NS18 164 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 GIMAP4Q9NUV9 329 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 NMRK1Q9NWW6 199 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 TMEM216Q9P0N5 145 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 PYCARDQ9ULZ3 195 aa11.17□□□□□ -0.62
TRAF4-209ENST00000473421 POLR3HQ9Y535 204 aaPredicted RBP11.17□□□□□ -0.62
TRAF4-209ENST00000473421 GIMAP1-GIMAP5A0A087WTJ2 511 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 C7orf72A4D263 438 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 E7EQL1 145 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 NDUFB5O43674 189 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 KRT6AP02538 564 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 KRT6BP04259 564 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 IGHV4-31P0DP07 118 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 ZNF16P17020 682 aaPredicted RBP11.16□□□□□ -0.62
TRAF4-209ENST00000473421 IL32P24001 234 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 KRT6CP48668 564 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 CLK3P49761 638 aaKnown RBP11.16□□□□□ -0.62
TRAF4-209ENST00000473421 MANFP55145 182 aaKnown RBP11.16□□□□□ -0.62
TRAF4-209ENST00000473421 P2RY6Q15077 328 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 NDUFAF6Q330K2 333 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 ZNF385BQ569K4 471 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 SPIN4Q56A73 249 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 CBLN3Q6UW01 205 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 GPRIN3Q6ZVF9 776 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 BHLHA15Q7RTS1 189 aaPredicted RBP11.16□□□□□ -0.62
TRAF4-209ENST00000473421 SLC16A11Q8NCK7 471 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 ATP6V1C2Q8NEY4 427 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 FAM110BQ8TC76 370 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 GPR151Q8TDV0 419 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 DCAKDQ8WVC6 231 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 HSD17B8Q92506 261 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 CIDECQ96AQ7 238 aaPredicted RBP11.16□□□□□ -0.62
TRAF4-209ENST00000473421 GIMAP5Q96F15 307 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 ZNF382Q96SR6 550 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 RHNO1Q9BSD3 238 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 HDHD5Q9BXW7 423 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 BEX2Q9BXY8 128 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 COQ10BQ9H8M1 238 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 TAS2R7Q9NYW3 318 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 KLHL13Q9P2N7 655 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 CDC42EP3Q9UKI2 254 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 TMCO1Q9UM00 188 aa11.16□□□□□ -0.62
TRAF4-209ENST00000473421 UTP11Q9Y3A2 253 aaKnown RBP11.16□□□□□ -0.62
TRAF4-209ENST00000473421 NPIPA5A0A0B4J1W7 369 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 TRIM49D1C9J1S8 452 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 NPIPA7E9PJI5 369 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 ABCD4O14678 606 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 KCNK2O95069 426 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 NKX2-2O95096 273 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 NPIPA8P0DM63 369 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 EFNA1P20827 205 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-209ENST00000473421 IGHV1-2P23083 117 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 IGFBP5P24593 272 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 HMOX2P30519 316 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 NUDT6P53370 316 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 CDH11P55287 796 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 VLDLRP98155 873 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 CAV1Q03135 178 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 LOXL1Q08397 574 aaPredicted RBP11.15□□□□□ -0.62
TRAF4-209ENST00000473421 ZNF763Q0D2J5 394 aa11.15□□□□□ -0.62
TRAF4-209ENST00000473421 HSPB3Q12988 150 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 70.1 ms