RNA–Protein interactions for RNA: ENST00000473373.1

CPNE1-222, Transcript of copine 1, humanhuman

TSL 2

Gene CPNE1, Length 821 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-222ENST00000473373 PLXDC2Q6UX71 529 aa10.43□□□□□ -0.74
CPNE1-222ENST00000473373 C6orf120Q7Z4R8 191 aa10.43□□□□□ -0.74
CPNE1-222ENST00000473373 LUZP2Q86TE4 346 aa10.43□□□□□ -0.74
CPNE1-222ENST00000473373 KIF18BQ86Y91 864 aa10.43□□□□□ -0.74
CPNE1-222ENST00000473373 LIX1LQ8IVB5 337 aa10.43□□□□□ -0.74
CPNE1-222ENST00000473373 RIMKLAQ8IXN7 391 aa10.43□□□□□ -0.74
CPNE1-222ENST00000473373 CLEC4FQ8N1N0 589 aa10.43□□□□□ -0.74
CPNE1-222ENST00000473373 C9orf106Q8NAJ2 232 aa10.43□□□□□ -0.74
CPNE1-222ENST00000473373 NAXEQ8NCW5 288 aa10.43□□□□□ -0.74
CPNE1-222ENST00000473373 OR4C3Q8NH37 302 aa10.43□□□□□ -0.74
CPNE1-222ENST00000473373 B4GALNT2Q8NHY0 566 aa10.43□□□□□ -0.74
CPNE1-222ENST00000473373 MBD3L2Q8NHZ7 208 aaPredicted RBP10.43□□□□□ -0.74
CPNE1-222ENST00000473373 ZFP3Q96NJ6 502 aa10.43□□□□□ -0.74
CPNE1-222ENST00000473373 ENKD1Q9H0I2 346 aa10.43□□□□□ -0.74
CPNE1-222ENST00000473373 WDR55Q9H6Y2 383 aaPredicted RBP10.43□□□□□ -0.74
CPNE1-222ENST00000473373 FBXO34Q9NWN3 711 aa10.43□□□□□ -0.74
CPNE1-222ENST00000473373 A0A087WZY1 265 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 PRSS51A0A1B0GVH4 220 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 SHISA8B8ZZ34 492 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 SDHDO14521 159 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 ZIC3O60481 467 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 SYNGR4O95473 234 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 AGR2O95994 175 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 AK1P00568 194 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 PLGP00747 810 aaPredicted RBP10.42□□□□□ -0.74
CPNE1-222ENST00000473373 ZNF708P17019 499 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 UQCRC2P22695 453 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 CEACAM8P31997 349 aaPredicted RBP10.42□□□□□ -0.74
CPNE1-222ENST00000473373 KIR2DL3P43628 341 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 EIF1AXP47813 144 aaKnown RBP10.42□□□□□ -0.74
CPNE1-222ENST00000473373 KHKP50053 298 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 ZNF136P52737 540 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 CLDN18P56856 261 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 STX1BP61266 288 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 UFM1P61960 85 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 GPAT3Q53EU6 434 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 PDSS1Q5T2R2 415 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 OR2A2Q6IF42 318 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 TNFAIP8L2Q6P589 184 aaPredicted RBP10.42□□□□□ -0.74
CPNE1-222ENST00000473373 SEM1Q6ZVN7 128 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 HDXQ7Z353 690 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 CAMKMTQ7Z624 323 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 ZAR1Q86SH2 424 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 DMRTC2Q8IXT2 367 aaPredicted RBP10.42□□□□□ -0.74
CPNE1-222ENST00000473373 ZZZ3Q8IYH5 903 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 LRRC34Q8IZ02 419 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 RELL2Q8NC24 303 aaPredicted RBP10.42□□□□□ -0.74
CPNE1-222ENST00000473373 OR8J2Q8NGG1 315 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 XAGE5Q8WWM1 108 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 RNASE6Q93091 150 aaKnown RBP10.42□□□□□ -0.74
CPNE1-222ENST00000473373 WNT2BQ93097 391 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 TESCQ96BS2 214 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 TLCD1Q96CP7 247 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 REXO5Q96IC2 774 aaKnown RBP10.42□□□□□ -0.74
CPNE1-222ENST00000473373 MARK4Q96L34 752 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 OR52E6Q96RD3 313 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 PANX1Q96RD7 426 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 SLC35A5Q9BS91 424 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 RTN4RQ9BZR6 473 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 TRIM8Q9BZR9 551 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 OR51I1Q9H343 314 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 TMEM185BQ9H7F4 350 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 NPDC1Q9NQX5 325 aaPredicted RBP10.42□□□□□ -0.74
CPNE1-222ENST00000473373 HAO1Q9UJM8 370 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 FOXD3Q9UJU5 478 aaPredicted RBP10.42□□□□□ -0.74
CPNE1-222ENST00000473373 ZNF337Q9Y3M9 751 aa10.42□□□□□ -0.74
CPNE1-222ENST00000473373 A0A1W2PQD3 144 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 C9JVG2 144 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 POLR3GO15318 223 aaPredicted RBP10.41□□□□□ -0.74
CPNE1-222ENST00000473373 STX11O75558 287 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 OPN1LWP04000 364 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 NGFRP08138 427 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 OR12D1P0DN82 309 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 IDO1P14902 403 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 MAP3K8P41279 467 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 KCNJ5P48544 419 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 SLC18A1P54219 525 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 ATP12AP54707 1039 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 C21orf58P58505 322 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 SIRPAP78324 504 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 TFF3Q07654 80 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 BCL2A1Q16548 175 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 GLYR1Q49A26 553 aaPredicted RBP10.41□□□□□ -0.74
CPNE1-222ENST00000473373 APOOLQ6UXV4 268 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 ZNF621Q6ZSS3 439 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 MTERF4Q7Z6M4 381 aaKnown RBP10.41□□□□□ -0.74
CPNE1-222ENST00000473373 ATP6V1C2Q8NEY4 427 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 PSMA8Q8TAA3 256 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 PIWIL2Q8TC59 973 aaKnown RBP10.41□□□□□ -0.74
CPNE1-222ENST00000473373 RNF138Q8WVD3 245 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 ZNF75CPQ92670 426 aaPredicted RBP10.41□□□□□ -0.74
CPNE1-222ENST00000473373 ARL8AQ96BM9 186 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 ZBTB8AQ96BR9 441 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 NTNG2Q96CW9 530 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 C14orf79Q96F83 325 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 ATP6V1G3Q96LB4 118 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 RNF145Q96MT1 663 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 SFXN3Q9BWM7 321 aa10.41□□□□□ -0.74
CPNE1-222ENST00000473373 RBM24Q9BX46 236 aaKnown RBP10.41□□□□□ -0.74
CPNE1-222ENST00000473373 CACYBPQ9HB71 228 aaKnown RBP10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms