RNA–Protein interactions for RNA: ENST00000473036.2

TPM3-216, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 746 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-216ENST00000473036 NPIPA2E9PIF3 369 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 NPIPA3F8WFD2 350 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 AQP7O14520 342 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 BCAS1O75363 584 aaPredicted RBP11.91□□□□□ -0.5
TPM3-216ENST00000473036 TRAPPC6AO75865 159 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 ANGPTL1O95841 491 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 ZCCHC18P0CG32 403 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 ESRRAP11474 423 aaPredicted RBP11.91□□□□□ -0.5
TPM3-216ENST00000473036 CALB2P22676 271 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 PTGS2P35354 604 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 CHI3L1P36222 383 aaPredicted RBP11.91□□□□□ -0.5
TPM3-216ENST00000473036 B3GALT5-AS1P59052 145 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 SYPL1Q16563 259 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 KRTAP21-3Q3LHN1 58 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 KLHL26Q53HC5 615 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 LRIF1Q5T3J3 769 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 AP1ARQ63HQ0 302 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 SP5Q6BEB4 398 aaPredicted RBP11.91□□□□□ -0.5
TPM3-216ENST00000473036 TYW3Q6IPR3 259 aaKnown RBP11.91□□□□□ -0.5
TPM3-216ENST00000473036 ARHGAP11AQ6P4F7 1023 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 BHLHB9Q6PI77 547 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 DLEU7Q6UYE1 221 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 HMGN2P46Q86SG4 172 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 FJX1Q86VR8 437 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 MCEMP1Q8IX19 187 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 MARVELD2Q8N4S9 558 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 FITM2Q8N6M3 262 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 TRIML2Q8N7C3 387 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 ANKFN1Q8N957 763 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 OR5M9Q8NGP3 310 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 FAM57AQ8TBR7 257 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 XAGE5Q8WWM1 108 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 RELTQ969Z4 430 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 ARSGQ96EG1 525 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 NSL1Q96IY1 281 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 ITCHQ96J02 903 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 OR2B2Q9GZK3 357 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 ZNF350Q9GZX5 532 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 TPT1P8Q9HAU6 139 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 PNPLA3Q9NST1 481 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 VAPAQ9P0L0 249 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 TAGLN3Q9UI15 199 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 LEF1Q9UJU2 399 aaPredicted RBP11.91□□□□□ -0.5
TPM3-216ENST00000473036 CSMD2Q7Z408 3487 aa11.91□□□□□ -0.5
TPM3-216ENST00000473036 NF1P21359 2839 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 A0A096LPI6 279 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 TRGV5A0A0B4J1U4 118 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 TRGV8A0A0C4DH27 118 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 FBP2O00757 339 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 GMFGO60234 142 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 SUSD5O60279 629 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 HCN1O60741 890 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 UGT2B17O75795 530 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 CBR3O75828 277 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 SOX30O94993 753 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 CHRM4P08173 479 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 KRT16P08779 473 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 NUDT7P0C024 238 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 ETFAP13804 333 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 PRF1P14222 555 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 PSMD4P55036 377 aaKnown RBP11.9□□□□□ -0.5
TPM3-216ENST00000473036 CHRNEQ04844 493 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 CRYZQ08257 329 aaKnown RBP11.9□□□□□ -0.5
TPM3-216ENST00000473036 NDUFAF6Q330K2 333 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 C6orf10Q5SRN2 563 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 RTL6Q6ICC9 239 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 FRRS1Q6ZNA5 592 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 CD163Q86VB7 1156 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 OR5M1Q8NGP8 315 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 NEIL3Q8TAT5 605 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 ROPN1LQ96C74 230 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 SH3GL1Q99961 368 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 G6PC3Q9BUM1 346 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 RSPO3Q9BXY4 272 aaPredicted RBP11.9□□□□□ -0.5
TPM3-216ENST00000473036 TRIM8Q9BZR9 551 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 SAP130Q9H0E3 1048 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 QRSL1Q9H0R6 528 aaKnown RBP11.9□□□□□ -0.5
TPM3-216ENST00000473036 CHST11Q9NPF2 352 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 UBQLN4Q9NRR5 601 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 MRTO4Q9UKD2 239 aaKnown RBP11.9□□□□□ -0.5
TPM3-216ENST00000473036 MKLN1Q9UL63 735 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 AP3M1Q9Y2T2 418 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 ARHGAP21Q5T5U3 1957 aa11.9□□□□□ -0.5
TPM3-216ENST00000473036 AKAP9Q99996 3911 aa11.9□□□□□ -0.51
TPM3-216ENST00000473036 A0A1W2PQD3 144 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 DUXAA6NLW8 204 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 SHISA8B8ZZ34 492 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 TNFRSF21O75509 655 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 TPOP07202 933 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 COX4I1P13073 169 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 ABOP16442 354 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 BMP7P18075 431 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 TCEA1P23193 301 aaKnown RBP11.89□□□□□ -0.51
TPM3-216ENST00000473036 GRNP28799 593 aaKnown RBP11.89□□□□□ -0.51
TPM3-216ENST00000473036 LCN1P31025 176 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 SRD5A2P31213 254 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 MAGEA8P43361 318 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 KHKP50053 298 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 ATP12AP54707 1039 aa11.89□□□□□ -0.51
TPM3-216ENST00000473036 GFRA1P56159 465 aa11.89□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms