RNA–Protein interactions for RNA: ENST00000471727.3

APLF-204, Transcript of aprataxin and PNKP like factor, humanhuman

TSL 1 (best)

Gene APLF, Length 1,633 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APLF-204ENST00000471727 GPR52Q9Y2T5 361 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 MRPS2Q9Y399 296 aaKnown RBP9.87□□□□□ -0.83
APLF-204ENST00000471727 GRIP1Q9Y3R0 1128 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 PCDHGB2Q9Y5G2 931 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 DOCK9Q9BZ29 2069 aa9.87□□□□□ -0.83
APLF-204ENST00000471727 A0A1W2PPC4 97 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 ZNF860A6NHJ4 632 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 SLC22A31A6NKX4 558 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 CLDN4O14493 209 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 SNPHO15079 494 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 AQP9O43315 295 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 CHP2O43745 196 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 NARSO43776 548 aaKnown RBP9.86□□□□□ -0.83
APLF-204ENST00000471727 CTNSO60931 367 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 DNAJB6O75190 326 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 ZNF217O75362 1048 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 LYPD3O95274 346 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 IFI30P13284 250 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 PVRP15151 417 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 GTF2E2P29084 291 aaKnown RBP9.86□□□□□ -0.83
APLF-204ENST00000471727 GALNSP34059 522 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 SEPHS1P49903 392 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 HOXC5Q00444 222 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 ZNF155Q12901 538 aaPredicted RBP9.86□□□□□ -0.83
APLF-204ENST00000471727 FAM53BQ14153 422 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 DOC2BQ14184 412 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 FZD2Q14332 565 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 GAS6Q14393 721 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 TRAM1Q15629 374 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 MAPK14Q16539 360 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 PRTGQ2VWP7 1150 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 DDI2Q5TDH0 399 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 METAP1DQ6UB28 335 aaPredicted RBP9.86□□□□□ -0.83
APLF-204ENST00000471727 PARGQ86W56 976 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 MCATQ8IVS2 390 aaKnown RBP9.86□□□□□ -0.83
APLF-204ENST00000471727 GALNT12Q8IXK2 581 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 C19orf47Q8N9M1 422 aaKnown RBP9.86□□□□□ -0.83
APLF-204ENST00000471727 FAM83FQ8NEG4 500 aaPredicted RBP9.86□□□□□ -0.83
APLF-204ENST00000471727 OR6C4Q8NGE1 309 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 FANK1Q8TC84 345 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 SLC2A12Q8TD20 617 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 TM9SF4Q92544 642 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 TOE1Q96GM8 510 aaKnown RBP9.86□□□□□ -0.83
APLF-204ENST00000471727 TCTN2Q96GX1 697 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 RBM18Q96H35 190 aaKnown RBP9.86□□□□□ -0.83
APLF-204ENST00000471727 PELOQ9BRX2 385 aaKnown RBP9.86□□□□□ -0.83
APLF-204ENST00000471727 G6PC3Q9BUM1 346 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 CMC2Q9NRP2 79 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 ERVK13-1Q9NX77 482 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 CARD8Q9Y2G2 431 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 MKI67P46013 3256 aaKnown RBP9.86□□□□□ -0.83
APLF-204ENST00000471727 MDC1Q14676 2089 aaKnown RBP9.86□□□□□ -0.83
APLF-204ENST00000471727 NINQ8N4C6 2090 aa9.86□□□□□ -0.83
APLF-204ENST00000471727 CHURC1-FNTBB4DL54 471 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 J3QRE1 110 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 WWP2O00308 870 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 BHLHE40O14503 412 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 KCNK2O95069 426 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 CBX7O95931 251 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 HTR2AP28223 471 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 SDC2P34741 201 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 PPP3R1P63098 170 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 IGLV3-21P80748 117 aaPredicted RBP9.85□□□□□ -0.83
APLF-204ENST00000471727 ID2Q02363 134 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 SCN1BQ07699 218 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 SLC13A2Q13183 592 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 CBX3Q13185 183 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 ELOCQ15369 112 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 FLYWCH1Q4VC44 716 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 CCNJQ5T5M9 372 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 OR2G6Q5TZ20 316 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 C22orf42Q6IC83 251 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 MZT2AQ6P582 158 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 SMARCD3Q6STE5 483 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 PRR23CQ6ZRP0 262 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 CPOQ8IVL8 374 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 ACBD7Q8N6N7 88 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 LSMEM1Q8N8F7 131 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 TMEM52Q8NDY8 209 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 OR52R1Q8NGF1 315 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 PATE1Q8WXA2 126 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 ASB15Q8WXK1 588 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 BPIFA2Q96DR5 249 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 TRMT61AQ96FX7 289 aaKnown RBP9.85□□□□□ -0.83
APLF-204ENST00000471727 CCNL2Q96S94 520 aaPredicted RBP9.85□□□□□ -0.83
APLF-204ENST00000471727 SECISBP2Q96T21 854 aaKnown RBP9.85□□□□□ -0.83
APLF-204ENST00000471727 GDF15Q99988 308 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 CHRNA10Q9GZZ6 450 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 KLHL25Q9H0H3 589 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 HINT3Q9NQE9 182 aaKnown RBP9.85□□□□□ -0.83
APLF-204ENST00000471727 SLC2A4RGQ9NR83 387 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 ADAM30Q9UKF2 790 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 ITGB1BP2Q9UKP3 347 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 NTNG1Q9Y2I2 539 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 A0A0B4J2E0 115 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 A0A1B0GX12 115 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 LILRA5A6NI73 299 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 PRR23D1E9PI22 279 aaPredicted RBP9.85□□□□□ -0.83
APLF-204ENST00000471727 SGK494L7N484 410 aa9.85□□□□□ -0.83
APLF-204ENST00000471727 CDC42EP2O14613 210 aa9.85□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms