RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 PISDQ9UG56 409 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 CPQQ9Y646 472 aa5.44□□□□□ -1.54
SMC5-202ENST00000471372 PDHXO00330 501 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 TAPBPO15533 448 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 FGF4P08620 206 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 HCKP08631 526 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 H2BFMP0C1H6 154 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 PABPC4LP0CB38 370 aaKnown RBP5.43□□□□□ -1.54
SMC5-202ENST00000471372 SDC1P18827 310 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 SLC1A4P43007 532 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 GNPDA1P46926 289 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 ATP4BP51164 291 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 TPMTP51580 245 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 ATP1B3P54709 279 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 CDH4P55283 916 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 OTUD4Q01804 1114 aaKnown RBP5.43□□□□□ -1.54
SMC5-202ENST00000471372 TGM3Q08188 693 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 COX10Q12887 443 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 MS4A18Q3C1V0 323 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 SLC25A52Q3SY17 297 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 FAM120AOSQ5T036 256 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 GCNT7Q6ZNI0 430 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 NR2C2APQ86WQ0 139 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 KLHDC8BQ8IXV7 354 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 Q8N9G6 341 aaPredicted RBP5.43□□□□□ -1.54
SMC5-202ENST00000471372 OR51G2Q8NGK0 314 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 PARD6BQ9BYG5 372 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 CRLF2Q9HC73 371 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 THEGQ9P2T0 379 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 ZNF639Q9UID6 485 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 SPATA2Q9UM82 520 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 AUP1Q9Y679 476 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 TTC41PQ6P2S7 1318 aa5.43□□□□□ -1.54
SMC5-202ENST00000471372 SERTM2A0A1B0GWG4 89 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 LRRIQ4A6NIV6 560 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 NR5A2O00482 541 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 CASQ2O14958 399 aaPredicted RBP5.42□□□□□ -1.54
SMC5-202ENST00000471372 CACNG3O60359 315 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 PGK1P00558 417 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 ALPIP09923 528 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 ANOS1P23352 680 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 SPRP35270 261 aaPredicted RBP5.42□□□□□ -1.54
SMC5-202ENST00000471372 ENPEPQ07075 957 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 TIGITQ495A1 244 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 OR8G2PQ6IF36 304 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 VITQ6UXI7 678 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 SERINC5Q86VE9 423 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 ALLCQ8N6M5 410 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 OR2T33Q8NG76 320 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 AENQ8WTP8 325 aaKnown RBP5.42□□□□□ -1.54
SMC5-202ENST00000471372 CRYGNQ8WXF5 182 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 C10orf35Q96D05 121 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 COPS8Q99627 209 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 CCDC28BQ9BUN5 200 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 ZNF696Q9H7X3 374 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 GAB2Q9UQC2 676 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 RASD1Q9Y272 281 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 NTNG1Q9Y2I2 539 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 OARD1Q9Y530 152 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 PNPLA6Q8IY17 1366 aa5.42□□□□□ -1.54
SMC5-202ENST00000471372 H3BMQ9 156 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 NTN3O00634 580 aaPredicted RBP5.41□□□□□ -1.54
SMC5-202ENST00000471372 TRIM3O75382 744 aaPredicted RBP5.41□□□□□ -1.54
SMC5-202ENST00000471372 ZNF432O94892 652 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 SEMA4FO95754 770 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 IGLV1-44P01699 117 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 HSMCR30P0CW71 290 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 RIDAP52758 137 aaKnown RBP5.41□□□□□ -1.54
SMC5-202ENST00000471372 EFNB2P52799 333 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 ST3GAL3Q11203 375 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 LAGE3Q14657 143 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 FASTKD3Q14CZ7 662 aaKnown RBP5.41□□□□□ -1.54
SMC5-202ENST00000471372 C14orf28Q4W4Y0 310 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 REP15Q6BDI9 236 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 KIAA1161Q6NSJ0 714 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 IFNEQ86WN2 208 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 OR10A7Q8NGE5 316 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 ST8SIA1Q92185 356 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 TAF15Q92804 592 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMC5-202ENST00000471372 PRICKLE1Q96MT3 831 aaPredicted RBP5.41□□□□□ -1.54
SMC5-202ENST00000471372 AGAP3Q96P47 875 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 UPF3AQ9H1J1 476 aaKnown RBP5.41□□□□□ -1.54
SMC5-202ENST00000471372 GLIPR2Q9H4G4 154 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 ELOVL2Q9NXB9 296 aa5.41□□□□□ -1.54
SMC5-202ENST00000471372 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.41□□□□□ -1.54
SMC5-202ENST00000471372 FER1L5A0AVI2 2057 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 IGLV4-3A0A075B6K6 122 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 A0A075B6Q4 140 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 HEATR9A2RTY3 570 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 TRABD2BA6NFA1 517 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 OR2AG2A6NM03 316 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 TMEM110-MUSTN1A8MSY1 372 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 FCN1O00602 326 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 ABCD4O14678 606 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 LRRTM2O43300 516 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 UPK3AO75631 287 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 NDUFB10O96000 172 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 AGTP01019 485 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 ANXA8P13928 327 aa5.4□□□□□ -1.54
SMC5-202ENST00000471372 HMGB2P26583 209 aaKnown RBP5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms