RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 ACOT11Q8WXI4 607 aaPredicted RBP16.72■□□□□ 0.27
SMC4-211ENST00000469858 SLC26A1Q9H2B4 701 aa16.72■□□□□ 0.27
SMC4-211ENST00000469858 FLRT3Q9NZU0 649 aa16.72■□□□□ 0.27
SMC4-211ENST00000469858 AKAP7Q9P0M2 348 aaPredicted RBP16.72■□□□□ 0.27
SMC4-211ENST00000469858 H3BN98 237 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 IL33O95760 270 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 KLK3P07288 261 aaPredicted RBP16.71■□□□□ 0.27
SMC4-211ENST00000469858 IGFBP1P08833 259 aaPredicted RBP16.71■□□□□ 0.27
SMC4-211ENST00000469858 NR1H2P55055 460 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 DCAF7P61962 342 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 NADK2Q4G0N4 442 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 GRAMD2AQ8IUY3 354 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 GPA33Q99795 319 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 POLR2J2Q9GZM3 115 aaKnown RBP16.71■□□□□ 0.27
SMC4-211ENST00000469858 TUBA8Q9NY65 449 aaPredicted RBP16.71■□□□□ 0.27
SMC4-211ENST00000469858 BLOC1S6Q9UL45 172 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 RNF6Q9Y252 685 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 SERINC4A6NH21 518 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 OR6C76A6NM76 312 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 XPNPEP2O43895 674 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 FMO6PO60774 539 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 CBFA2T3O75081 653 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 CSTAP01040 98 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 LINGO3P0C6S8 592 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 IFNGR2P38484 337 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 TOP3AQ13472 1001 aaPredicted RBP16.71■□□□□ 0.27
SMC4-211ENST00000469858 NDUFAF6Q330K2 333 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 FOXB2Q5VYV0 432 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 MRPL14Q6P1L8 145 aaKnown RBP16.71■□□□□ 0.27
SMC4-211ENST00000469858 PRICKLE2Q7Z3G6 844 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 APLFQ8IW19 511 aaPredicted RBP16.71■□□□□ 0.27
SMC4-211ENST00000469858 SGCDQ92629 289 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 MR1Q95460 341 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 ZNF559Q9BR84 538 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 EVA1AQ9H8M9 152 aa16.71■□□□□ 0.27
SMC4-211ENST00000469858 GPN3Q9UHW5 284 aaPredicted RBP16.71■□□□□ 0.27
SMC4-211ENST00000469858 MRTO4Q9UKD2 239 aaKnown RBP16.71■□□□□ 0.27
SMC4-211ENST00000469858 CACNA1HO95180 2353 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 TEX51A0A1B0GUA7 166 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 SAGE2PA6NJ88 616 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 ZAR1LA6NP61 321 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 ABCB7O75027 752 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 ADAM11O75078 769 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 HPGDP15428 266 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 GPR143P51810 404 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 NUBP1P53384 320 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 CLDN6P56747 220 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 ILKQ13418 452 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 PAPD4Q6PIY7 484 aaKnown RBP16.7■□□□□ 0.26
SMC4-211ENST00000469858 GATSQ8NAP1 163 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 B3GNT7Q8NFL0 401 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 PIGXQ8TBF5 258 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 GRHL3Q8TE85 626 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 FAM46AQ96IP4 442 aaKnown RBP16.7■□□□□ 0.26
SMC4-211ENST00000469858 ADOQ96SZ5 270 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 UBQLN4Q9NRR5 601 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 IMPAD1Q9NX62 359 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 CNIH4Q9P003 139 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 LOXL2Q9Y4K0 774 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 HEATR5AQ86XA9 2040 aa16.7■□□□□ 0.26
SMC4-211ENST00000469858 TRIM64CA6NLI5 447 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 M0R129 80 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 PIP5K1CO60331 668 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 REM1O75628 298 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 UTS2O95399 124 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 IL12BP29460 328 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 ACAA2P42765 397 aaKnown RBP16.69■□□□□ 0.26
SMC4-211ENST00000469858 COX10Q12887 443 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 SMN1Q16637 294 aaKnown RBP16.69■□□□□ 0.26
SMC4-211ENST00000469858 ZSWIM7Q19AV6 140 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 FAM69BQ5VUD6 431 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 NRMQ8IXM6 262 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 CMIPQ8IY22 773 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 DEPDC4Q8N2C3 294 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 ZNF527Q8NB42 609 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 TOR1AIP2Q8NFQ8 470 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 GNPDA2Q8TDQ7 276 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 APH1BQ8WW43 257 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 C8orf44Q96CB5 159 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 PHOX2BQ99453 314 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 PRSS27Q9BQR3 290 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 LIN28AQ9H9Z2 209 aaKnown RBP16.69■□□□□ 0.26
SMC4-211ENST00000469858 TMEM27Q9HBJ8 222 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 PRR33A8MZF0 331 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 B4E171 279 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 PTGES3LE9PB15 166 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 SCDO00767 359 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 WBP4O75554 376 aaKnown RBP16.69■□□□□ 0.26
SMC4-211ENST00000469858 RFPL3O75679 317 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 TP53P04637 393 aaPredicted RBP16.69■□□□□ 0.26
SMC4-211ENST00000469858 CCDC159P0C7I6 412 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 KRT20P35900 424 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 ETV5P41161 510 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 TSPAN7P41732 249 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 OMPP47874 163 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 INSM1Q01101 510 aaPredicted RBP16.69■□□□□ 0.26
SMC4-211ENST00000469858 ALDH6A1Q02252 535 aaKnown RBP16.69■□□□□ 0.26
SMC4-211ENST00000469858 PLCXD2Q0VAA5 305 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 KLHL26Q53HC5 615 aa16.69■□□□□ 0.26
SMC4-211ENST00000469858 DESI1Q6ICB0 168 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms