RNA–Protein interactions for RNA: ENST00000469123.5

SSBP1-208, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 5

Gene SSBP1, Length 662 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-208ENST00000469123 PCNX3Q9H6A9 2034 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 SPENQ96T58 3664 aaKnown RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 TRBV5-3A0A0A0MS03 114 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 TRGV8A0A0C4DH27 118 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 A0A0G2JPF8 293 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 AGAP5A6NIR3 686 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 HNRNPCL2B2RXH8 293 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 HNRNPCL3B7ZW38 293 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 C5orf58C9J3I9 102 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 GTPBP1O00178 669 aaKnown RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 NDUFAB1O14561 156 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 ZNF264O43296 627 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 HNRNPCL1O60812 293 aaKnown RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 H6PDO95479 791 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 GSNP06396 782 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 DBIP07108 87 aaKnown RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 TPOP07202 933 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 HNRNPCL4P0DMR1 293 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 UBL4AP11441 157 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 UQCRBP14927 111 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 HOXB9P17482 250 aaPredicted RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 GPX2P18283 190 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 DRD4P21917 467 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 FKBP2P26885 142 aaKnown RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 ADH6P28332 368 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 SLC6A8P48029 635 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 P2RX1P51575 399 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 SMSP52788 366 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 MVDP53602 400 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 EEFSECP57772 596 aaKnown RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 RBBP4Q09028 425 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 KLF10Q13118 480 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 CBFBQ13951 182 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 NFYCQ13952 458 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 GPR68Q15743 365 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 EIF2S3LQ2VIR3 472 aaKnown RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 TRMT5Q32P41 509 aaKnown RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 LIN52Q52LA3 116 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 DDX59Q5T1V6 619 aaKnown RBP eCLIP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 GCNT6Q5T4J0 391 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 VASNQ6EMK4 673 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 TYW3Q6IPR3 259 aaKnown RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 FRRS1Q6ZNA5 592 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 MARCH3Q86UD3 253 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 CD163Q86VB7 1156 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 KRT73Q86Y46 540 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 ZNF440Q8IYI8 595 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 CLEC4FQ8N1N0 589 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 BHLHE22Q8NFJ8 381 aaPredicted RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 OR8J3Q8NGG0 315 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 BBS10Q8TAM1 723 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 PHOSPHO1Q8TCT1 267 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 DUSP19Q8WTR2 217 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 ABTB1Q969K4 478 aaPredicted RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 SLC35B4Q969S0 331 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 CMTM5Q96DZ9 223 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 ARSGQ96EG1 525 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 OTUB1Q96FW1 271 aaPredicted RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 SFXN2Q96NB2 322 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 CGREF1Q99674 301 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 ELAC2Q9BQ52 826 aaKnown RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 SPATA5L1Q9BVQ7 753 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 LAT2Q9GZY6 243 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 DSN1Q9H410 356 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 TMEM38AQ9H6F2 299 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 BCL2L10Q9HD36 194 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 EXOSC3Q9NQT5 275 aaKnown RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 VAPAQ9P0L0 249 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 FBXL2Q9UKC9 423 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 IFT52Q9Y366 437 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 GPC6Q9Y625 555 aaPredicted RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 KCNE3Q9Y6H6 103 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 ARHGAP21Q5T5U3 1957 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 NCOA6Q14686 2063 aaPredicted RBP7.78□□□□□ -1.16
SSBP1-208ENST00000469123 MED12Q93074 2177 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 BAHCC1Q9P281 2608 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 DSPPQ9NZW4 1301 aa7.78□□□□□ -1.16
SSBP1-208ENST00000469123 ICE1Q9Y2F5 2266 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 CACNA1CQ13936 2221 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 SERINC4A6NH21 518 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 GJE1A6NN92 205 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 NPIPA2E9PIF3 369 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 NPIPA3F8WFD2 350 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 CCL21O00585 134 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 ADAM10O14672 748 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 HCRTR2O43614 444 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 FCMRO60667 390 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 TNFRSF21O75509 655 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 UGT2B17O75795 530 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 DCTN3O75935 186 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 PDE9AO76083 593 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 CSTAP01040 98 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 THBS1P07996 1170 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 TFPTP0C1Z6 253 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 PEPDP12955 493 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 NID1P14543 1247 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 ETS2P15036 469 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 CPN1P15169 458 aa7.77□□□□□ -1.17
SSBP1-208ENST00000469123 IL7RP16871 459 aa7.77□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms