RNA–Protein interactions for RNA: ENST00000468653.5

SMC4-209, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,756 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-209ENST00000468653 DNAJB12Q9NXW2 375 aaKnown RBP17.48■□□□□ 0.39
SMC4-209ENST00000468653 SLC7A7Q9UM01 511 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 SPEGQ15772 3267 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 A0A087WUU8 490 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 CSTAP01040 98 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 HTR2AP28223 471 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 ELK4P28324 431 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 IFNGR2P38484 337 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 RNF4P78317 190 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 PLAURQ03405 335 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 PLCXD2Q0VAA5 305 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 NCF4Q15080 339 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 TRIP6Q15654 476 aaKnown RBP17.48■□□□□ 0.39
SMC4-209ENST00000468653 KLHL26Q53HC5 615 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 DHRS13Q6UX07 377 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 ZNF550Q7Z398 422 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 APCDD1LQ8NCL9 501 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 C17orf47Q8NEP4 570 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 TOR1AIP2Q8NFQ8 470 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 C8orf44Q96CB5 159 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 VMP1Q96GC9 406 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 HRASLS5Q96KN8 279 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 DEPDC7Q96QD5 511 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 PITX2Q99697 317 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 DGCR6LQ9BY27 220 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 YTHDF1Q9BYJ9 559 aaKnown RBP17.48■□□□□ 0.39
SMC4-209ENST00000468653 SEMA4CQ9C0C4 833 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 TMEM27Q9HBJ8 222 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 FAM86C1Q9NVL1 165 aa17.48■□□□□ 0.39
SMC4-209ENST00000468653 PTRH2Q9Y3E5 179 aaKnown RBP17.48■□□□□ 0.39
SMC4-209ENST00000468653 SCDO00767 359 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 ABCB7O75027 752 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 LCN1P31025 176 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 ISL1P61371 349 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 ESRRGP62508 458 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 CD47Q08722 323 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 MEP1AQ16819 746 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 KCTD21Q4G0X4 260 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 ZNF517Q6ZMY9 492 aaPredicted RBP17.47■□□□□ 0.39
SMC4-209ENST00000468653 NKAIN4Q8IVV8 208 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 SLC34A3Q8N130 599 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 ZNF441Q8N8Z8 693 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 TSPAN14Q8NG11 270 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 RNF217Q8TC41 542 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 OIT3Q8WWZ8 545 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 ACOT11Q8WXI4 607 aaPredicted RBP17.47■□□□□ 0.39
SMC4-209ENST00000468653 SLC35B4Q969S0 331 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 WDR77Q9BQA1 342 aaPredicted RBP17.47■□□□□ 0.39
SMC4-209ENST00000468653 LRFN3Q9BTN0 628 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 DDA1Q9BW61 102 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 TOR4AQ9NXH8 423 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 FLRT3Q9NZU0 649 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 PPIEQ9UNP9 301 aaKnown RBP17.47■□□□□ 0.39
SMC4-209ENST00000468653 HSPE1-MOB4S4R3N1 261 aa17.47■□□□□ 0.39
SMC4-209ENST00000468653 SMNDC1O75940 238 aaKnown RBP eCLIP17.46■□□□□ 0.392e-16■■■■■ 67.6
SMC4-209ENST00000468653 THY1P04216 161 aa17.46■□□□□ 0.39
SMC4-209ENST00000468653 SMIM18P0DKX4 95 aa17.46■□□□□ 0.39
SMC4-209ENST00000468653 MMP11P24347 488 aa17.46■□□□□ 0.39
SMC4-209ENST00000468653 PSPHP78330 225 aa17.46■□□□□ 0.39
SMC4-209ENST00000468653 STPG1Q5TH74 334 aa17.46■□□□□ 0.39
SMC4-209ENST00000468653 FAM69BQ5VUD6 431 aa17.46■□□□□ 0.39
SMC4-209ENST00000468653 Q6ZPB1 254 aaPredicted RBP17.46■□□□□ 0.39
SMC4-209ENST00000468653 ZER1Q7Z7L7 766 aa17.46■□□□□ 0.39
SMC4-209ENST00000468653 PIP4P1Q86T03 277 aa17.46■□□□□ 0.39
SMC4-209ENST00000468653 SLCO6A1Q86UG4 719 aa17.46■□□□□ 0.39
SMC4-209ENST00000468653 AMER2Q8N7J2 671 aa17.46■□□□□ 0.39
SMC4-209ENST00000468653 TP53INP1Q96A56 240 aa17.46■□□□□ 0.39
SMC4-209ENST00000468653 OMA1Q96E52 524 aa17.46■□□□□ 0.39
SMC4-209ENST00000468653 COL25A1Q9BXS0 654 aaPredicted RBP17.46■□□□□ 0.39
SMC4-209ENST00000468653 MRPS26Q9BYN8 205 aaKnown RBP17.46■□□□□ 0.39
SMC4-209ENST00000468653 LIN28AQ9H9Z2 209 aaKnown RBP17.46■□□□□ 0.39
SMC4-209ENST00000468653 ZNF223Q9UK11 482 aaPredicted RBP17.46■□□□□ 0.39
SMC4-209ENST00000468653 SLC35A3Q9Y2D2 325 aa17.46■□□□□ 0.39
SMC4-209ENST00000468653 CCDC187A0A096LP49 1063 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 TRBV11-1A0A0K0K1C0 115 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 PMS2P1A4D2B8 440 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 E9PQ18 207 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 PLD2O14939 933 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 OSMP13725 252 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 ATP6V1B1P15313 513 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 POU1F1P28069 291 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 ABCD3P28288 659 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 GSSP48637 474 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 GTF2A1P52655 376 aaPredicted RBP17.45■□□□□ 0.38
SMC4-209ENST00000468653 NRG3P56975 720 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 LSM11P83369 360 aaKnown RBP eCLIP17.45■□□□□ 0.387e-97■■■■■ 245.7
SMC4-209ENST00000468653 CTU2Q2VPK5 515 aaKnown RBP17.45■□□□□ 0.38
SMC4-209ENST00000468653 C1orf94Q6P1W5 598 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 C6orf15Q6UXA7 325 aaPredicted RBP17.45■□□□□ 0.38
SMC4-209ENST00000468653 APLFQ8IW19 511 aaPredicted RBP17.45■□□□□ 0.38
SMC4-209ENST00000468653 PIGXQ8TBF5 258 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 GNPDA2Q8TDQ7 276 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 ARSGQ96EG1 525 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 TRIM2Q9C040 744 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 ADNPQ9H2P0 1102 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 PADI1Q9ULC6 663 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 TSPAN2O60636 221 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 CLPTM1O96005 669 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 TBXA2RP21731 343 aa17.45■□□□□ 0.38
SMC4-209ENST00000468653 TGM1P22735 817 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms