RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 TBX19O60806 448 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 SS18L1O75177 396 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-207ENST00000467819 SYNGR4O95473 234 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 LY6G6DO95868 133 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 CHEK2O96017 543 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 THBDP07204 575 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 NGFRP08138 427 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 ALOX5P09917 674 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 HPGDP15428 266 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 KRT4P19013 534 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 FRKP42685 505 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-207ENST00000467819 PDE7AQ13946 482 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 PCLAFQ15004 111 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 PLPPR5Q32ZL2 321 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 CCNJQ5T5M9 372 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 OR6Y1Q8NGX8 325 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 OR2V1Q8NHB1 315 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 FAM110BQ8TC76 370 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 ZBTB8AQ96BR9 441 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 CHMP6Q96FZ7 201 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 GATA5Q9BWX5 397 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-207ENST00000467819 HHATLQ9HCP6 504 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 PLSCR4Q9NRQ2 329 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 ACSS1Q9NUB1 689 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-207ENST00000467819 PAQR5Q9NXK6 330 aaPredicted RBP18.86■□□□□ 0.61
COL9A3-207ENST00000467819 NTMQ9P121 344 aa18.86■□□□□ 0.61
COL9A3-207ENST00000467819 FAM171A2A8MVW0 826 aa18.85■□□□□ 0.61
COL9A3-207ENST00000467819 SCDO00767 359 aa18.85■□□□□ 0.61
COL9A3-207ENST00000467819 LSM1O15116 133 aaKnown RBP18.85■□□□□ 0.61
COL9A3-207ENST00000467819 RAC1P63000 192 aa18.85■□□□□ 0.61
COL9A3-207ENST00000467819 BEX5Q5H9J7 111 aa18.85■□□□□ 0.61
COL9A3-207ENST00000467819 HBMQ6B0K9 141 aa18.85■□□□□ 0.61
COL9A3-207ENST00000467819 STAC2Q6ZMT1 411 aa18.85■□□□□ 0.61
COL9A3-207ENST00000467819 TDRPQ86YL5 185 aa18.85■□□□□ 0.61
COL9A3-207ENST00000467819 DDIASQ8IXT1 998 aa18.85■□□□□ 0.61
COL9A3-207ENST00000467819 PPP1R14CQ8TAE6 165 aa18.85■□□□□ 0.61
COL9A3-207ENST00000467819 ARSGQ96EG1 525 aa18.85■□□□□ 0.61
COL9A3-207ENST00000467819 UBQLN4Q9NRR5 601 aa18.85■□□□□ 0.61
COL9A3-207ENST00000467819 MID2Q9UJV3 735 aa18.85■□□□□ 0.61
COL9A3-207ENST00000467819 CSPG4Q6UVK1 2322 aa18.85■□□□□ 0.61
COL9A3-207ENST00000467819 A0A0J9YW62 118 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 C7orf72A4D263 438 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 TRIM64A6NGJ6 449 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 TRIM64BA6NI03 449 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 TMEM233B4DJY2 109 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 ME2P23368 584 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 PSMA4P25789 261 aaKnown RBP18.84■□□□□ 0.61
COL9A3-207ENST00000467819 PRIM2P49643 509 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 CD226Q15762 336 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 CPTPQ5TA50 214 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 KANK2Q63ZY3 851 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 PRSS57Q6UWY2 283 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 ESPNLQ6ZVH7 1005 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 LRRN4CLQ8ND94 238 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 B4GALNT2Q8NHY0 566 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 POC1BQ8TC44 478 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 ACTRT2Q8TDY3 377 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 FAM120BQ96EK7 910 aaKnown RBP18.84■□□□□ 0.61
COL9A3-207ENST00000467819 BDH2Q9BUT1 245 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 C12orf49Q9H741 205 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 ZCCHC3Q9NUD5 404 aaKnown RBP18.84■□□□□ 0.61
COL9A3-207ENST00000467819 TMED5Q9Y3A6 229 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 DNAJC15Q9Y5T4 150 aa18.84■□□□□ 0.61
COL9A3-207ENST00000467819 ADAMDEC1O15204 470 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 KLF4O43474 513 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 CHRNGP07510 517 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 BCKDHAP12694 445 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 PPP3CBP16298 524 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 IL11P20809 199 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 ASMTP46597 345 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 SERPINB4P48594 390 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 RNF144AP50876 292 aaPredicted RBP18.83■□□□□ 0.6
COL9A3-207ENST00000467819 POU6F2P78424 691 aaPredicted RBP18.83■□□□□ 0.6
COL9A3-207ENST00000467819 LASP1Q14847 261 aaKnown RBP18.83■□□□□ 0.6
COL9A3-207ENST00000467819 RNF165Q6ZSG1 346 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 PLEKHM3Q6ZWE6 761 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 WFDC8Q8IUA0 241 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 MISPQ8IVT2 679 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 TWIST2Q8WVJ9 160 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 CDS1Q92903 461 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 TRMOQ9BU70 441 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 ACTR6Q9GZN1 396 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 SIRT3Q9NTG7 399 aaPredicted RBP18.83■□□□□ 0.6
COL9A3-207ENST00000467819 GIN1Q9NXP7 522 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 GIMAP2Q9UG22 337 aa18.83■□□□□ 0.6
COL9A3-207ENST00000467819 TRIM13O60858 407 aa18.82■□□□□ 0.6
COL9A3-207ENST00000467819 PLAUP00749 431 aa18.82■□□□□ 0.6
COL9A3-207ENST00000467819 HMGN2P05204 90 aaKnown RBP18.82■□□□□ 0.6
COL9A3-207ENST00000467819 AGTR1P30556 359 aa18.82■□□□□ 0.6
COL9A3-207ENST00000467819 LCN1P31025 176 aa18.82■□□□□ 0.6
COL9A3-207ENST00000467819 SFTPDP35247 375 aa18.82■□□□□ 0.6
COL9A3-207ENST00000467819 HPCAL1P37235 193 aa18.82■□□□□ 0.6
COL9A3-207ENST00000467819 PTH2RP49190 550 aa18.82■□□□□ 0.6
COL9A3-207ENST00000467819 FOXF1Q12946 379 aa18.82■□□□□ 0.6
COL9A3-207ENST00000467819 PDSS1Q5T2R2 415 aa18.82■□□□□ 0.6
COL9A3-207ENST00000467819 ALKBH2Q6NS38 261 aa18.82■□□□□ 0.6
COL9A3-207ENST00000467819 ZCCHC12Q6PEW1 402 aa18.82■□□□□ 0.6
COL9A3-207ENST00000467819 ZNF704Q6ZNC4 412 aaPredicted RBP18.82■□□□□ 0.6
COL9A3-207ENST00000467819 BEND4Q6ZU67 534 aa18.82■□□□□ 0.6
COL9A3-207ENST00000467819 R3HCC1LQ7Z5L2 792 aaKnown RBP18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms