RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 TPSAB1Q15661 275 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 CHI3L2Q15782 390 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 USH1GQ495M9 461 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 ATAD3BQ5T9A4 648 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 CGB2Q6NT52 195 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 PPP1R42Q7Z4L9 355 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 GPR137CQ8N3F9 429 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 CLDN19Q8N6F1 224 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 PNPT1Q8TCS8 783 aaKnown RBP3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 GTSF1Q8WW33 167 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 C6orf203Q9P0P8 240 aaPredicted RBP3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 NPIPA1Q9UND3 350 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 MMP24Q9Y5R2 645 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 MAD1L1Q9Y6D9 718 aa3.82□□□□□ -1.8
GAPVD1-211ENST00000467707 ATP10DQ9P241 1426 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 SAGE2PA6NJ88 616 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 XPO1O14980 1071 aaKnown RBP3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 GMFGO60234 142 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 TSC22D2O75157 780 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 KIAA0754O94854 1291 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 H2BFMP0C1H6 154 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 SLC35E2P0CK97 266 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 RPA2P15927 270 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 ATP6V1C1P21283 382 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 GDF1P27539 372 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 NMT1P30419 496 aaKnown RBP3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 PRKAR2BP31323 418 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 DHPSP49366 369 aaPredicted RBP3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 TAF6P49848 677 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 MEOX2P50222 304 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 PPT1P50897 306 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 AP3M2P53677 418 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 PLA2G16P53816 162 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 ERVPABLB-1P60509 514 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 SELPLGQ14242 412 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 NDUFA9Q16795 377 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 GSG1Q2KHT4 349 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 PAN3Q58A45 887 aaKnown RBP3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 FAM120AOSQ5T036 256 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 SPINK14Q6IE38 97 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 GALNT17Q6IS24 598 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 ZNF525Q8N782 197 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 SYT14Q8NB59 555 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 OR10A7Q8NGE5 316 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 OR2T34Q8NGX1 318 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 OSTF1Q92882 214 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 C7orf34Q96L11 122 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 CRNKL1Q9BZJ0 848 aaKnown RBP3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 PALMDQ9NP74 551 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 RNF14Q9UBS8 474 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 TMCC3Q9ULS5 477 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 OARD1Q9Y530 152 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 FLVCR1Q9Y5Y0 555 aa3.81□□□□□ -1.8
GAPVD1-211ENST00000467707 MSH4O15457 936 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 OR1F1O43749 312 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 SRSF10O75494 262 aaKnown RBP3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 B3GAT3O94766 335 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 NOL4O94818 638 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 STSP08842 583 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 SERPINA2P20848 420 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 ZP3P21754 424 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 MDH2P40926 338 aaKnown RBP3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 BDKRB1P46663 353 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 IFNAR2P48551 515 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 CBX1P83916 185 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 OC90Q02509 493 aaPredicted RBP3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 PJVKQ0ZLH3 352 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 RAB40BQ12829 278 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 ANKDD1AQ495B1 522 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 PAGE2BQ5JRK9 111 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 LCE1FQ5T754 118 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 OR5M10Q6IEU7 315 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 ACSM5Q6NUN0 579 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 UFSP1Q6NVU6 142 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 CES3Q6UWW8 571 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 HPS6Q86YV9 775 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 APOBEC3FQ8IUX4 373 aaKnown RBP3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 CNIH3Q8TBE1 160 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 M1APQ8TC57 530 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 MRAPQ8TCY5 172 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 TRUB1Q8WWH5 349 aaKnown RBP3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 OR5B2Q96R09 309 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 CITED1Q99966 193 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 C19orf24Q9BVV8 132 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 RHOJQ9H4E5 214 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 MIEF1Q9NQG6 463 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 GNG12Q9UBI6 72 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 ABCD2Q9UBJ2 740 aa3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 APOBEC3BQ9UH17 382 aaKnown RBP3.8□□□□□ -1.8
GAPVD1-211ENST00000467707 FRMPD4Q14CM0 1322 aa3.79□□□□□ -1.8
GAPVD1-211ENST00000467707 H0YCG3 227 aa3.79□□□□□ -1.8
GAPVD1-211ENST00000467707 UGT2B17O75795 530 aa3.79□□□□□ -1.8
GAPVD1-211ENST00000467707 PRG2P13727 222 aa3.79□□□□□ -1.8
GAPVD1-211ENST00000467707 FASP25445 335 aa3.79□□□□□ -1.8
GAPVD1-211ENST00000467707 PTBP1P26599 531 aaKnown RBP eCLIP3.79□□□□□ -1.86e-8■■■■■ 32.4
GAPVD1-211ENST00000467707 CA8P35219 290 aa3.79□□□□□ -1.8
GAPVD1-211ENST00000467707 OTUD4Q01804 1114 aaKnown RBP3.79□□□□□ -1.8
GAPVD1-211ENST00000467707 CNTN2Q02246 1040 aa3.79□□□□□ -1.8
GAPVD1-211ENST00000467707 SBK1Q52WX2 424 aa3.79□□□□□ -1.8
GAPVD1-211ENST00000467707 LRRC23Q53EV4 343 aaPredicted RBP3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms