RNA–Protein interactions for RNA: ENST00000466897.1

NPHP4-205, Transcript of nephrocystin 4, humanhuman

TSL 1 (best)

Gene NPHP4, Length 1,192 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-205ENST00000466897 OR52P1PQ8NH57 321 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 WDR60Q8WVS4 1066 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 SLC35B4Q969S0 331 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 DTNBP1Q96EV8 351 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 HES7Q9BYE0 225 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 RTN4RQ9BZR6 473 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 QRSL1Q9H0R6 528 aaKnown RBP13.88□□□□□ -0.19
NPHP4-205ENST00000466897 ARMC7Q9H6L4 198 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 EVA1AQ9H8M9 152 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 GALNT9Q9HCQ5 603 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 EXOSC3Q9NQT5 275 aaKnown RBP13.88□□□□□ -0.19
NPHP4-205ENST00000466897 KLHL1Q9NR64 748 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 MAGEL2Q9UJ55 1249 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 PRDM4Q9UKN5 801 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 ZNF232Q9UNY5 417 aa13.88□□□□□ -0.19
NPHP4-205ENST00000466897 PIEZO2Q9H5I5 2752 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 A0A0G2JMM0 328 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 A0A1W2PPB8 328 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 A0A1W2PRS3 328 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 KIR3DP1A8MWS1 328 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 CXCR6O00574 342 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 GSC2O15499 205 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 SCO2O43819 266 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 EIF4E2O60573 245 aaKnown RBP13.87□□□□□ -0.19
NPHP4-205ENST00000466897 MFN2O95140 757 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 ME2P23368 584 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 MSX1P28360 303 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 DNASE1L1P49184 302 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 CRYBA2P53672 197 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 SUMO3P55854 103 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-205ENST00000466897 EEF1A1P68104 462 aaKnown RBP13.87□□□□□ -0.19
NPHP4-205ENST00000466897 KCNJ10P78508 379 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 CD226Q15762 336 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 PLEKHN1Q494U1 663 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-205ENST00000466897 EIPR1Q53HC9 387 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 TIGD3Q6B0B8 471 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 PGM2L1Q6PCE3 622 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 EIF3MQ7L2H7 374 aaKnown RBP13.87□□□□□ -0.19
NPHP4-205ENST00000466897 MARCH3Q86UD3 253 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 FADS6Q8N9I5 356 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 TEX19Q8NA77 164 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 RNF145Q96MT1 663 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 THTPAQ9BU02 230 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 GORASP2Q9H8Y8 452 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 ZFP64Q9NPA5 681 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 PPP4R1LQ9P1A2 415 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 GMPR2Q9P2T1 348 aaKnown RBP13.87□□□□□ -0.19
NPHP4-205ENST00000466897 SEC14L3Q9UDX4 400 aa13.87□□□□□ -0.19
NPHP4-205ENST00000466897 ZNF443Q9Y2A4 671 aaPredicted RBP13.87□□□□□ -0.19
NPHP4-205ENST00000466897 CDHR4A6H8M9 788 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 LRRC3CA6NJW4 275 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 M0QX08 132 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 SYT5O00445 386 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 GSTA4O15217 222 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 ZNF264O43296 627 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 SORBS2O94875 1100 aaKnown RBP13.86□□□□□ -0.19
NPHP4-205ENST00000466897 GLSO94925 669 aaPredicted RBP13.86□□□□□ -0.19
NPHP4-205ENST00000466897 RASAL1O95294 804 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 C8BP07358 591 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 UBL4AP11441 157 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 AQP1P29972 269 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 PGM1P36871 562 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 MEOX1P50221 254 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 GPR85P60893 370 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 LY6DQ14210 128 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 NADK2Q4G0N4 442 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 ZNF311Q5JNZ3 666 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 PLCZ1Q86YW0 608 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 ARMC8Q8IUR7 673 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 RNF148Q8N7C7 305 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 ZNF614Q8N883 585 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 WDSUB1Q8N9V3 476 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 Q8NA96 180 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 PHOSPHO1Q8TCT1 267 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 TAMM41Q96BW9 452 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 ASB9Q96DX5 294 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 PINK1Q9BXM7 581 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 CADM1Q9BY67 442 aaKnown RBP13.86□□□□□ -0.19
NPHP4-205ENST00000466897 LAT2Q9GZY6 243 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 QPCTLQ9NXS2 382 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 TUBA8Q9NY65 449 aaPredicted RBP13.86□□□□□ -0.19
NPHP4-205ENST00000466897 SNX13Q9Y5W8 968 aa13.86□□□□□ -0.19
NPHP4-205ENST00000466897 TLN1Q9Y490 2541 aaKnown RBP13.86□□□□□ -0.19
NPHP4-205ENST00000466897 PINLYPA6NC86 204 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 GMNNO75496 209 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 CBR3O75828 277 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 CSTAP01040 98 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 MASP1P48740 699 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 PLAURQ03405 335 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 DMTNQ08495 405 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 SKP2Q13309 424 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 TRIM25Q14258 630 aaKnown RBP13.85□□□□□ -0.19
NPHP4-205ENST00000466897 GANABQ14697 944 aaKnown RBP13.85□□□□□ -0.19
NPHP4-205ENST00000466897 ZSCAN26Q16670 478 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 MRPL2Q5T653 305 aaKnown RBP13.85□□□□□ -0.19
NPHP4-205ENST00000466897 GLYATQ6IB77 296 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 ZNF836Q6ZNA1 936 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.85□□□□□ -0.19
NPHP4-205ENST00000466897 VRK2Q86Y07 508 aa13.85□□□□□ -0.19
NPHP4-205ENST00000466897 ZNF440Q8IYI8 595 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms