RNA–Protein interactions for RNA: ENST00000466862.1

GTF3C3-209, Transcript of general transcription factor IIIC subunit 3, humanhuman

TSL 2

Gene GTF3C3, Length 447 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C3-209ENST00000466862 CYP11B1P15538 503 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 RPA2P15927 270 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 GLRA2P23416 452 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 DPP4P27487 766 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 PTPN6P29350 595 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 ADRA1AP35348 466 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 DLSTP36957 453 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 NAPAP54920 295 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 LRRC74AQ0VAA2 488 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 IL24Q13007 206 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 CHIT1Q13231 466 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 GPM6BQ13491 265 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 KLF5Q13887 457 aaPredicted RBP1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 CD226Q15762 336 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 PDK4Q16654 411 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 HAGHQ16775 308 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 CCDC57Q2TAC2 916 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 ADPRMQ3LIE5 342 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 NADK2Q4G0N4 442 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 CEP55Q53EZ4 464 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 STEAP1BQ6NZ63 245 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 LRRC8BQ6P9F7 803 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 GOLGA7Q7Z5G4 137 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 ZDHHC21Q8IVQ6 265 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 H1FOOQ8IZA3 346 aaPredicted RBP1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 GCNT2Q8N0V5 402 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 STKLD1Q8NE28 680 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 OR52M1Q8NGK5 317 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 RDH11Q8TC12 318 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 TMEM37Q8WXS4 190 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 TTC25Q96NG3 672 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 VPS35Q96QK1 796 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 NDUFAF3Q9BU61 184 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 HCAR1Q9BXC0 346 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 NLNQ9BYT8 704 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 POLR1EQ9GZS1 481 aaKnown RBP1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 TMEM117Q9H0C3 514 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 RMND5AQ9H871 391 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 CYTL1Q9NRR1 136 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 DCAF16Q9NXF7 216 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 GDAP2Q9NXN4 497 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 RDH8Q9NYR8 311 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 P2RX2Q9UBL9 471 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 LHX3Q9UBR4 397 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 ATP6V1HQ9UI12 483 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 HPCAL4Q9UM19 191 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 MRPS7Q9Y2R9 242 aaKnown RBP1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 ZNF175Q9Y473 711 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 DDX49Q9Y6V7 483 aaKnown RBP1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 PTCH1Q13635 1447 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 SF3B1O75533 1304 aaKnown RBP eCLIP1.63□□□□□ -2.156e-7■■■■■ 71.8
GTF3C3-209ENST00000466862 RAD54L2Q9Y4B4 1467 aa1.63□□□□□ -2.15
GTF3C3-209ENST00000466862 KDRP35968 1356 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 IGLV3-16A0A075B6K0 115 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 RNF222A6NCQ9 220 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 A8MUI8 341 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 SH2D1BO14796 132 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 XPO1O14980 1071 aaKnown RBP1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 CFLARO15519 480 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 TBX19O60806 448 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 SPAG6O75602 509 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 RHOBTB1O94844 696 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 OR4F21O95013 312 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 SNX4O95219 450 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 ANP32DO95626 131 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 UGT2B4P06133 528 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 TPM2P07951 284 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 H2AFZP0C0S5 128 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 CLUP10909 449 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 PDHBP11177 359 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 ATP6V1C1P21283 382 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 DRD5P21918 477 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 HTR2AP28223 471 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 OTX2P32243 289 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 PTGFRP43088 359 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 RPS4XP62701 263 aaKnown RBP1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 HERVK_113P63132 956 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 ERVK-8P63133 956 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 NUCB2P80303 420 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 SPIBQ01892 262 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 ORC2Q13416 577 aaPredicted RBP1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 TRIP10Q15642 601 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 ZIC1Q15915 447 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 KYAT1Q16773 422 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 ZSWIM7Q19AV6 140 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 LRRC23Q53EV4 343 aaPredicted RBP1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 CFAP157Q5JU67 520 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 ZNF691Q5VV52 312 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 NCR3LG1Q68D85 454 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 ASPHD2Q6ICH7 369 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 CENPPQ6IPU0 288 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 UFSP1Q6NVU6 142 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 NIPAL3Q6P499 406 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 SLC39A4Q6P5W5 647 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 CES3Q6UWW8 571 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 DPY19L2P2Q6ZN68 376 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 PAQR9Q6ZVX9 377 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 MOB1BQ7L9L4 216 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 P4HA3Q7Z4N8 544 aa1.62□□□□□ -2.15
GTF3C3-209ENST00000466862 VPS36Q86VN1 386 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms