RNA–Protein interactions for RNA: ENST00000463486.5

VPS52-214, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 925 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-214ENST00000463486 ABTB1Q969K4 478 aaPredicted RBP16.03■□□□□ 0.16
VPS52-214ENST00000463486 ZNF524Q96C55 264 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 NPAS1Q99742 590 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 TRIM33Q9UPN9 1127 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 DTNAQ9Y4J8 743 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 ADGRG4Q8IZF6 3080 aa16.03■□□□□ 0.16
VPS52-214ENST00000463486 NR5A2O00482 541 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 DYNC1I1O14576 645 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 WDR1O75083 606 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 KRT75O95678 551 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 GLI4P10075 376 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 TROVE2P10155 538 aaKnown RBP eCLIP16.02■□□□□ 0.16
VPS52-214ENST00000463486 ESRRAP11474 423 aaPredicted RBP16.02■□□□□ 0.16
VPS52-214ENST00000463486 CPN1P15169 458 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 MSX1P28360 303 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 STARP49675 285 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 ARFIP2P53365 341 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 PLAURQ03405 335 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 ZNF117Q03924 483 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 SF3A3Q12874 501 aaKnown RBP eCLIP16.02■□□□□ 0.16
VPS52-214ENST00000463486 SYPL1Q16563 259 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 C6orf10Q5SRN2 563 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 C16orf62Q7Z3J2 963 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 MTERF4Q7Z6M4 381 aaKnown RBP16.02■□□□□ 0.16
VPS52-214ENST00000463486 RETREG3Q86VR2 466 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 MISPQ8IVT2 679 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 TRNT1Q96Q11 434 aaKnown RBP16.02■□□□□ 0.16
VPS52-214ENST00000463486 TTYH2Q9BSA4 534 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 SLC38A1Q9H2H9 487 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 RABEP2Q9H5N1 569 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 POLE3Q9NRF9 147 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 SUCOQ9UBS9 1254 aaKnown RBP16.02■□□□□ 0.16
VPS52-214ENST00000463486 ICAM5Q9UMF0 924 aa16.02■□□□□ 0.16
VPS52-214ENST00000463486 PHF3Q92576 2039 aaKnown RBP16.01■□□□□ 0.15
VPS52-214ENST00000463486 CRYBG3Q68DQ2 2970 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 CELSR2Q9HCU4 2923 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 DNAJA2O60884 412 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 TNFRSF21O75509 655 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 CHRM4P08173 479 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 TFPTP0C1Z6 253 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 ETFAP13804 333 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 HK1P19367 917 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 CHMP24386 653 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 PSMA4P25789 261 aaKnown RBP16.01■□□□□ 0.15
VPS52-214ENST00000463486 ADH7P40394 386 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 CLDN15P56746 228 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 CLDN18P56856 261 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 NUP107P57740 925 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 CHRNEQ04844 493 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 GANABQ14697 944 aaKnown RBP16.01■□□□□ 0.15
VPS52-214ENST00000463486 GPR68Q15743 365 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 GLYR1Q49A26 553 aaPredicted RBP16.01■□□□□ 0.15
VPS52-214ENST00000463486 PDZK1Q5T2W1 519 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 ATAD3BQ5T9A4 648 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 RPTNQ6XPR3 784 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 MRGPRGQ86SM5 289 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 ADGRE4PQ86SQ3 457 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 IFNEQ86WN2 208 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 C10orf111Q8N326 155 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 C10orf82Q8WW14 230 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 RUBCNLQ9H714 662 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 PTGES2Q9H7Z7 377 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 SAR1AQ9NR31 198 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 VAPAQ9P0L0 249 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 KLHL14Q9P2G3 628 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 DKKL1Q9UK85 242 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 LIPT1Q9Y234 373 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 RPH3AQ9Y2J0 694 aaPredicted RBP16.01■□□□□ 0.15
VPS52-214ENST00000463486 ZNF337Q9Y3M9 751 aa16.01■□□□□ 0.15
VPS52-214ENST00000463486 OR2M5A3KFT3 312 aa16■□□□□ 0.15
VPS52-214ENST00000463486 SERINC4A6NH21 518 aa16■□□□□ 0.15
VPS52-214ENST00000463486 FIGNL2A6NMB9 653 aa16■□□□□ 0.15
VPS52-214ENST00000463486 AHRRA9YTQ3 701 aa16■□□□□ 0.15
VPS52-214ENST00000463486 BCAS1O75363 584 aaPredicted RBP16■□□□□ 0.15
VPS52-214ENST00000463486 TOXO94900 526 aa16■□□□□ 0.15
VPS52-214ENST00000463486 H6PDO95479 791 aa16■□□□□ 0.15
VPS52-214ENST00000463486 HOXD4P09016 255 aaPredicted RBP16■□□□□ 0.15
VPS52-214ENST00000463486 LINGO3P0C6S8 592 aa16■□□□□ 0.15
VPS52-214ENST00000463486 BMP2P12643 396 aa16■□□□□ 0.15
VPS52-214ENST00000463486 HPGDP15428 266 aa16■□□□□ 0.15
VPS52-214ENST00000463486 AGAP20933 346 aa16■□□□□ 0.15
VPS52-214ENST00000463486 TCEA1P23193 301 aaKnown RBP16■□□□□ 0.15
VPS52-214ENST00000463486 PMPCAQ10713 525 aa16■□□□□ 0.15
VPS52-214ENST00000463486 NDUFAF6Q330K2 333 aa16■□□□□ 0.15
VPS52-214ENST00000463486 ACSF3Q4G176 576 aaPredicted RBP16■□□□□ 0.15
VPS52-214ENST00000463486 C1orf185Q5T7R7 199 aa16■□□□□ 0.15
VPS52-214ENST00000463486 LRRC74BQ6ZQY2 392 aa16■□□□□ 0.15
VPS52-214ENST00000463486 ZNF808Q8N4W9 903 aaPredicted RBP16■□□□□ 0.15
VPS52-214ENST00000463486 DPP10Q8N608 796 aa16■□□□□ 0.15
VPS52-214ENST00000463486 ZNF527Q8NB42 609 aa16■□□□□ 0.15
VPS52-214ENST00000463486 OR5M1Q8NGP8 315 aa16■□□□□ 0.15
VPS52-214ENST00000463486 POC1BQ8TC44 478 aa16■□□□□ 0.15
VPS52-214ENST00000463486 PHOSPHO1Q8TCT1 267 aa16■□□□□ 0.15
VPS52-214ENST00000463486 TSPEARQ8WU66 669 aa16■□□□□ 0.15
VPS52-214ENST00000463486 SH3YL1Q96HL8 342 aaPredicted RBP16■□□□□ 0.15
VPS52-214ENST00000463486 IKZF5Q9H5V7 419 aa16■□□□□ 0.15
VPS52-214ENST00000463486 HHATLQ9HCP6 504 aa16■□□□□ 0.15
VPS52-214ENST00000463486 CARD8Q9Y2G2 431 aa16■□□□□ 0.15
VPS52-214ENST00000463486 WDR45Q9Y484 360 aa16■□□□□ 0.15
VPS52-214ENST00000463486 KIAA1549Q9HCM3 1950 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 59.4 ms