RNA–Protein interactions for RNA: ENST00000460265.5

LMNB1-203, Transcript of lamin B1, humanhuman

TSL 1 (best)

Gene LMNB1, Length 3,475 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-203ENST00000460265 SUN3Q8TAQ9 357 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 DCLRE1CQ96SD1 692 aaKnown RBP14.4□□□□□ -0.1
LMNB1-203ENST00000460265 CLEC4MQ9H2X3 399 aaPredicted RBP14.4□□□□□ -0.1
LMNB1-203ENST00000460265 LHX9Q9NQ69 397 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 ING4Q9UNL4 249 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 PROS1P07225 676 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 ALAS2P22557 587 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 GIPRP48546 466 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 DUSP2Q05923 314 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 TRIQKQ629K1 86 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 LRRC25Q8N386 305 aaPredicted RBP14.4□□□□□ -0.1
LMNB1-203ENST00000460265 DPCDQ9BVM2 203 aaPredicted RBP14.4□□□□□ -0.1
LMNB1-203ENST00000460265 SAV1Q9H4B6 383 aaPredicted RBP14.4□□□□□ -0.1
LMNB1-203ENST00000460265 LOC105369274A0A096LPK9 316 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 LOC102723532A0A0G2JNH3 316 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 LINC00862A6NCI5 91 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 OR2W5A6NFC9 320 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 K7EQS6 105 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 SNRNP200O75643 2136 aaKnown RBP14.4□□□□□ -0.1
LMNB1-203ENST00000460265 RFPL3O75679 317 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 KLHL18O94889 574 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 ZNF155Q12901 538 aaPredicted RBP14.4□□□□□ -0.1
LMNB1-203ENST00000460265 GPR18Q14330 331 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 AANATQ16613 207 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 ZER1Q7Z7L7 766 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 LAPTM4BQ86VI4 370 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 CDK20Q8IZL9 346 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 OR4N4Q8N0Y3 316 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 SLC37A3Q8NCC5 494 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 OR51A7Q8NH64 312 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 GABARAPL3Q9BY60 117 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 CSNK1G3Q9Y6M4 447 aa14.4□□□□□ -0.1
LMNB1-203ENST00000460265 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.39□□□□□ -0.11
LMNB1-203ENST00000460265 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.39□□□□□ -0.11
LMNB1-203ENST00000460265 CDRT1O95170 752 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 SMSP52788 366 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 ST3GAL3Q11203 375 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 HYAL1Q12794 435 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 ERV3-1Q14264 604 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 TRMT12Q53H54 448 aaKnown RBP14.39□□□□□ -0.11
LMNB1-203ENST00000460265 TIGD3Q6B0B8 471 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 ACSM5Q6NUN0 579 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 PGBD2Q6P3X8 592 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 LINC00518Q8N0U6 118 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 RBM18Q96H35 190 aaKnown RBP14.39□□□□□ -0.11
LMNB1-203ENST00000460265 OR10H1Q9Y4A9 318 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 HNRNPA2B1P22626 353 aaKnown RBP14.39□□□□□ -0.11
LMNB1-203ENST00000460265 MAOBP27338 520 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 NDUFS1P28331 727 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 GABRA3P34903 492 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 RORCP51449 518 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 PCBP3P57721 371 aaKnown RBP14.39□□□□□ -0.11
LMNB1-203ENST00000460265 C21orf58P58505 322 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 ZNF91Q05481 1191 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 FCRLBQ6BAA4 426 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 C22orf42Q6IC83 251 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 HDDC2Q7Z4H3 204 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 BBS10Q8TAM1 723 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 ELP4Q96EB1 424 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 CRELD1Q96HD1 420 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 HHIPQ96QV1 700 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 SRRQ9GZT4 340 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 SERHL2Q9H4I8 314 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 A4GALTQ9NPC4 353 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 PRDM7Q9NQW5 492 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 OR6C2Q9NZP2 312 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 SCML1Q9UN30 329 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 SGK494L7N484 410 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 PRKYO43930 277 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 GNSP15586 552 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 TGM4P49221 684 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 ASAH1Q13510 395 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 ZNF79Q15937 498 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 LCN1P1Q5VSP4 162 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 SLC27A4Q6P1M0 643 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 TMEM81Q6P7N7 255 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 TEX261Q6UWH6 196 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 RASGRP3Q8IV61 690 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 GDPD1Q8N9F7 314 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 CREB3L4Q8TEY5 395 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 ST8SIA4Q92187 359 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 MRGPRX1Q96LB2 322 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 PITX2Q99697 317 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 TMED9Q9BVK6 235 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 U3KQ87 197 aa14.39□□□□□ -0.11
LMNB1-203ENST00000460265 DUXAA6NLW8 204 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 RPS19P39019 145 aaKnown RBP14.38□□□□□ -0.11
LMNB1-203ENST00000460265 PDX1P52945 283 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 PER3P56645 1201 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 SLC48A1Q6P1K1 146 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 LIX1LQ8IVB5 337 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 CAMKVQ8NCB2 501 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 TCEAL2Q9H3H9 227 aaPredicted RBP14.38□□□□□ -0.11
LMNB1-203ENST00000460265 IFT22Q9H7X7 185 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 ACTR10Q9NZ32 417 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 ZNF624Q9P2J8 865 aaPredicted RBP14.38□□□□□ -0.11
LMNB1-203ENST00000460265 COMMD3Q9UBI1 195 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 ZNF222Q9UK12 451 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 MGAT4AQ9UM21 535 aa14.38□□□□□ -0.11
LMNB1-203ENST00000460265 PLXND1Q9Y4D7 1925 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms