RNA–Protein interactions for RNA: ENST00000460170.2

PTPRU-205, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,337 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-205ENST00000460170 SDR9C7Q8NEX9 313 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 TM4SF18Q96CE8 201 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 PLAC1Q9HBJ0 212 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 BABAM2Q9NXR7 383 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 VNN3Q9NY84 501 aa13.86□□□□□ -0.19
PTPRU-205ENST00000460170 VSTM2BA6NLU5 285 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 FAM171A2A8MVW0 826 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 ANKRD28O15084 1053 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 SOX9P48436 509 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 NFATC4Q14934 902 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 SYT6Q5T7P8 510 aaPredicted RBP13.85□□□□□ -0.19
PTPRU-205ENST00000460170 ULK3Q6PHR2 472 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 NLGN4XQ8N0W4 816 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 OR4F15Q8NGB8 312 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 OR52R1Q8NGF1 315 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 C16orf58Q96GQ5 468 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 EGLN3Q9H6Z9 239 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 CPNE7Q9UBL6 633 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 A0A1W2PQ09 198 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 SLC5A10A0PJK1 596 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 TMEM202A6NGA9 273 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 CCINQ13939 588 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 SGCAQ16586 387 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 ACSM3Q53FZ2 586 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 OR2G6Q5TZ20 316 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 LIMS2Q7Z4I7 341 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 CHPT1Q8WUD6 406 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 SGCDQ92629 289 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 MR1Q95460 341 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 NIPSNAP1Q9BPW8 284 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 RP2O75695 350 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 BMP4P12644 408 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 UGT2B10P36537 528 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 ISL1P61371 349 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 ZNF852Q6ZMS4 543 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 MEPCEQ7L2J0 689 aaKnown RBP13.85□□□□□ -0.19
PTPRU-205ENST00000460170 SLC46A3Q7Z3Q1 461 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 MCATQ8IVS2 390 aaKnown RBP13.85□□□□□ -0.19
PTPRU-205ENST00000460170 CD93Q9NPY3 652 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 TAS2R8Q9NYW2 309 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 ERVK-19Q9WJR5 959 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 C17orf105B2RV13 164 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 ERCC1P07992 297 aaPredicted RBP13.85□□□□□ -0.19
PTPRU-205ENST00000460170 SLC6A12P48065 614 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 S100A10P60903 97 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 OR1Q1Q15612 314 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 UBQLN2Q9UHD9 624 aa13.85□□□□□ -0.19
PTPRU-205ENST00000460170 AK6Q9Y3D8 172 aaKnown RBP13.85□□□□□ -0.19
PTPRU-205ENST00000460170 PEX12O00623 359 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 PEX11BO96011 259 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 DRD5P21918 477 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 SF3A2Q15428 464 aaKnown RBP13.84□□□□□ -0.19
PTPRU-205ENST00000460170 RAB11BQ15907 218 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 C1orf94Q6P1W5 598 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 SPAG16Q8N0X2 631 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 GDI2P50395 445 aaKnown RBP13.84□□□□□ -0.19
PTPRU-205ENST00000460170 KCNJ10P78508 379 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 GRK1Q15835 563 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 HDAC8Q9BY41 377 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 OR10A4Q9H209 315 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 A4GALTQ9NPC4 353 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 SLC25A37Q9NYZ2 338 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 A8MVJ9 347 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 SDC3O75056 442 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 KCNJ5P48544 419 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 NR0B1P51843 470 aaKnown RBP13.84□□□□□ -0.19
PTPRU-205ENST00000460170 CEBPGP53567 150 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 OCLNQ16625 522 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 RAB12Q6IQ22 244 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 LRRC56Q8IYG6 542 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-205ENST00000460170 KLHL15Q96M94 604 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 TMEM121BQ9BXQ6 578 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-205ENST00000460170 AMBRA1Q9C0C7 1298 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 QRSL1Q9H0R6 528 aaKnown RBP13.84□□□□□ -0.19
PTPRU-205ENST00000460170 TANGO2Q6ICL3 276 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 HAVCR2Q8TDQ0 301 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 ZNF471Q9BX82 626 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-205ENST00000460170 GLIPR2Q9H4G4 154 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 PCDHB16Q9NRJ7 776 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 INPP5EQ9NRR6 644 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 SPATA6Q9NWH7 488 aaPredicted RBP13.84□□□□□ -0.19
PTPRU-205ENST00000460170 FBXL3Q9UKT7 428 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 SLC35A3Q9Y2D2 325 aa13.84□□□□□ -0.19
PTPRU-205ENST00000460170 TRAV27A0A087WT01 109 aa13.83□□□□□ -0.19
PTPRU-205ENST00000460170 SLC9B1P1A6NJY1 282 aa13.83□□□□□ -0.19
PTPRU-205ENST00000460170 FAM155AB1AL88 458 aaPredicted RBP13.83□□□□□ -0.19
PTPRU-205ENST00000460170 LBX1P52954 281 aa13.83□□□□□ -0.19
PTPRU-205ENST00000460170 GAB1Q13480 694 aa13.83□□□□□ -0.19
PTPRU-205ENST00000460170 AGAP6Q5VW22 663 aa13.83□□□□□ -0.19
PTPRU-205ENST00000460170 OR13C3Q8NGS6 347 aa13.83□□□□□ -0.19
PTPRU-205ENST00000460170 BCL7CQ8WUZ0 217 aaPredicted RBP13.83□□□□□ -0.19
PTPRU-205ENST00000460170 AGAP4Q96P64 663 aa13.83□□□□□ -0.19
PTPRU-205ENST00000460170 LPAR4Q99677 370 aa13.83□□□□□ -0.19
PTPRU-205ENST00000460170 EVA1AQ9H8M9 152 aa13.83□□□□□ -0.19
PTPRU-205ENST00000460170 MYO7AQ13402 2215 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 LOC105378220A0A1B0GUY1 285 aaPredicted RBP13.83□□□□□ -0.2
PTPRU-205ENST00000460170 NPIPA2E9PIF3 369 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 NPIPA3F8WFD2 350 aa13.83□□□□□ -0.2
PTPRU-205ENST00000460170 MTRF1O75570 445 aaKnown RBP13.83□□□□□ -0.2
PTPRU-205ENST00000460170 GYPBP06028 91 aa13.83□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms