RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 PROB1E7EW31 1015 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 BCAS1O75363 584 aaPredicted RBP22.49■■□□□ 1.19
U2AF1-204ENST00000459639 REM1O75628 298 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 UTS2O95399 124 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 ADAP00813 363 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 LYNP07948 512 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 PRG2P13727 222 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 RNF144AP50876 292 aaPredicted RBP22.49■■□□□ 1.19
U2AF1-204ENST00000459639 PCOLCEQ15113 449 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 PODNL1Q6PEZ8 512 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 AQP11Q8NBQ7 271 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 SLC38A4Q969I6 547 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 OMA1Q96E52 524 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 ZNF559Q9BR84 538 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 RIBC2Q9H4K1 309 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 PNPLA3Q9NST1 481 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 MGAT4BQ9UQ53 548 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 SLC35A3Q9Y2D2 325 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 PCDHGB5Q9Y5G0 923 aa22.49■■□□□ 1.19
U2AF1-204ENST00000459639 ABCB7O75027 752 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 UGT2B11O75310 529 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 CLIC3O95833 236 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 GKN3PP0CG01 181 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 TBXA2RP21731 343 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 ABCD3P28288 659 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 ADH7P40394 386 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 NRG3P56975 720 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 FAM69BQ5VUD6 431 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 ZNF550Q7Z398 422 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 PRR22Q8IZ63 422 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 OR5L2Q8NGL0 311 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 CT55Q8WUE5 264 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 SLC41A3Q96GZ6 507 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 ADOQ96SZ5 270 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 NIPSNAP1Q9BPW8 284 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 GRIP2Q9C0E4 1043 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 B3GNT4Q9C0J1 378 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 ZNF700Q9H0M5 742 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 FOXJ2Q9P0K8 574 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 ENOPH1Q9UHY7 261 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 NTNG1Q9Y2I2 539 aa22.48■■□□□ 1.19
U2AF1-204ENST00000459639 IGHV1-45A0A0A0MS14 117 aa22.47■■□□□ 1.19
U2AF1-204ENST00000459639 LOC100130705A0A1B0GUX0 176 aa22.47■■□□□ 1.19
U2AF1-204ENST00000459639 SPAARA0A1B0GVQ0 90 aa22.47■■□□□ 1.19
U2AF1-204ENST00000459639 A0A1W2PQ72 361 aa22.47■■□□□ 1.19
U2AF1-204ENST00000459639 OR10H3O60404 316 aa22.47■■□□□ 1.19
U2AF1-204ENST00000459639 CSRP1P21291 193 aaKnown RBP22.47■■□□□ 1.19
U2AF1-204ENST00000459639 HTR2AP28223 471 aa22.47■■□□□ 1.19
U2AF1-204ENST00000459639 PNLIPRP2P54317 469 aa22.47■■□□□ 1.19
U2AF1-204ENST00000459639 FOXD4Q12950 439 aaPredicted RBP22.47■■□□□ 1.19
U2AF1-204ENST00000459639 IL18R1Q13478 541 aa22.47■■□□□ 1.19
U2AF1-204ENST00000459639 FNDC7Q5VTL7 733 aa22.47■■□□□ 1.19
U2AF1-204ENST00000459639 GDF7Q7Z4P5 450 aa22.47■■□□□ 1.19
U2AF1-204ENST00000459639 PARP8Q8N3A8 854 aa22.47■■□□□ 1.19
U2AF1-204ENST00000459639 ESX1Q8N693 406 aa22.47■■□□□ 1.19
U2AF1-204ENST00000459639 FLRT3Q9NZU0 649 aa22.47■■□□□ 1.19
U2AF1-204ENST00000459639 HS3ST3B1Q9Y662 390 aa22.47■■□□□ 1.19
U2AF1-204ENST00000459639 MUC6Q6W4X9 2439 aa22.47■■□□□ 1.19
U2AF1-204ENST00000459639 EP300Q09472 2414 aaPredicted RBP22.46■■□□□ 1.19
U2AF1-204ENST00000459639 TRAPPC13A5PLN9 417 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 SCDO00767 359 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 CSTAP01040 98 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 NGFRP08138 427 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 CYP4B1P13584 511 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 HPGDP15428 266 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 MMP11P24347 488 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 RPS6KA3P51812 740 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 ZNF440Q8IYI8 595 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 FAM71CQ8NEG0 241 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 OR4K5Q8NGD3 323 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 MUS81Q96NY9 551 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 DGCR6LQ9BY27 220 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 BCKDKO14874 412 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 ZFAND5O76080 213 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 GASTP01350 101 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 COX6A1P12074 109 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 TCN2P20062 427 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 POLR2IP36954 125 aaKnown RBP22.46■■□□□ 1.19
U2AF1-204ENST00000459639 UGT2B15P54855 530 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 MYBPC1Q00872 1141 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 NPRL3Q12980 569 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 KEAP1Q14145 624 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 OR1Q1Q15612 314 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 PGBD2Q6P3X8 592 aa22.46■■□□□ 1.19
U2AF1-204ENST00000459639 C8orf59Q8N0T1 100 aaPredicted RBP22.46■■□□□ 1.19
U2AF1-204ENST00000459639 E9PQ18 207 aa22.45■■□□□ 1.18
U2AF1-204ENST00000459639 ICOSLGO75144 302 aa22.45■■□□□ 1.18
U2AF1-204ENST00000459639 TNFAIP8O95379 198 aa22.45■■□□□ 1.18
U2AF1-204ENST00000459639 THY1P04216 161 aa22.45■■□□□ 1.18
U2AF1-204ENST00000459639 ACAA2P42765 397 aaKnown RBP22.45■■□□□ 1.18
U2AF1-204ENST00000459639 EXT1Q16394 746 aa22.45■■□□□ 1.18
U2AF1-204ENST00000459639 ZNF613Q6PF04 617 aa22.45■■□□□ 1.18
U2AF1-204ENST00000459639 AMER2Q8N7J2 671 aa22.45■■□□□ 1.18
U2AF1-204ENST00000459639 ACOT11Q8WXI4 607 aaPredicted RBP22.45■■□□□ 1.18
U2AF1-204ENST00000459639 GTPBP3Q969Y2 492 aaKnown RBP22.45■■□□□ 1.18
U2AF1-204ENST00000459639 TCFL5Q9UL49 500 aa22.45■■□□□ 1.18
U2AF1-204ENST00000459639 A0A087WUU8 490 aa22.44■■□□□ 1.18
U2AF1-204ENST00000459639 OR6C70A6NIJ9 312 aa22.44■■□□□ 1.18
U2AF1-204ENST00000459639 TARDBPQ13148 414 aaKnown RBP eCLIP22.44■■□□□ 1.18
U2AF1-204ENST00000459639 ZNF691Q5VV52 312 aa22.44■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms