RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 FRKP42685 505 aaPredicted RBP19.25■□□□□ 0.67
CPNE1-220ENST00000458038 SLC18A2Q05940 514 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 PLPPR5Q32ZL2 321 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 HBMQ6B0K9 141 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 RNF165Q6ZSG1 346 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 TRABD2AQ86V40 505 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 STEAP2Q8NFT2 490 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 MZB1Q8WU39 189 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 PPCDCQ96CD2 204 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 PLPPR2Q96GM1 343 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 ACTR6Q9GZN1 396 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 LRTM1Q9HBL6 345 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 MED17Q9NVC6 651 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 SNX8Q9Y5X2 465 aa19.25■□□□□ 0.67
CPNE1-220ENST00000458038 GIMAP1-GIMAP5A0A087WTJ2 511 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 SOX30O94993 753 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 KCNK2O95069 426 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 PROCP04070 461 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 NEFHP12036 1026 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 PRKAG1P54619 331 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 CARD18P57730 90 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 GALNT10Q86SR1 603 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 PRIMA1Q86XR5 153 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 OSTF1Q92882 214 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 MTERF3Q96E29 417 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 GIMAP5Q96F15 307 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 REXO5Q96IC2 774 aaKnown RBP19.24■□□□□ 0.67
CPNE1-220ENST00000458038 FCRL1Q96LA6 429 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 RNF145Q96MT1 663 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 USB1Q9BQ65 265 aaKnown RBP19.24■□□□□ 0.67
CPNE1-220ENST00000458038 GP6Q9HCN6 339 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 NGBQ9NPG2 151 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 OXSMQ9NWU1 459 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 TBK1Q9UHD2 729 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 CLEC4AQ9UMR7 237 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 TMED5Q9Y3A6 229 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 FREM1Q5H8C1 2179 aa19.24■□□□□ 0.67
CPNE1-220ENST00000458038 SONP18583 2426 aaKnown RBP19.23■□□□□ 0.67
CPNE1-220ENST00000458038 A0A0J9YW62 118 aa19.23■□□□□ 0.67
CPNE1-220ENST00000458038 SCDO00767 359 aa19.23■□□□□ 0.67
CPNE1-220ENST00000458038 TNFSF11O14788 317 aa19.23■□□□□ 0.67
CPNE1-220ENST00000458038 ALOX5P09917 674 aa19.23■□□□□ 0.67
CPNE1-220ENST00000458038 ELK4P28324 431 aa19.23■□□□□ 0.67
CPNE1-220ENST00000458038 CRHR1P34998 444 aa19.23■□□□□ 0.67
CPNE1-220ENST00000458038 RNPS1Q15287 305 aaKnown RBP19.23■□□□□ 0.67
CPNE1-220ENST00000458038 ETFDHQ16134 617 aa19.23■□□□□ 0.67
CPNE1-220ENST00000458038 ADAM5Q6NVV9 412 aa19.23■□□□□ 0.67
CPNE1-220ENST00000458038 MTERF4Q7Z6M4 381 aaKnown RBP19.23■□□□□ 0.67
CPNE1-220ENST00000458038 SLC16A11Q8NCK7 471 aa19.23■□□□□ 0.67
CPNE1-220ENST00000458038 B4GALNT2Q8NHY0 566 aa19.23■□□□□ 0.67
CPNE1-220ENST00000458038 CIDECQ96AQ7 238 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-220ENST00000458038 TACO1Q9BSH4 297 aaKnown RBP19.23■□□□□ 0.67
CPNE1-220ENST00000458038 GIN1Q9NXP7 522 aa19.23■□□□□ 0.67
CPNE1-220ENST00000458038 SH3BP4Q9P0V3 963 aa19.23■□□□□ 0.67
CPNE1-220ENST00000458038 NUP214P35658 2090 aaPredicted RBP19.23■□□□□ 0.67
CPNE1-220ENST00000458038 GJE1A6NN92 205 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 PLIN3O60664 434 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 CHEK2O96017 543 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 ACP2P11117 423 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 CPA3P15088 417 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 ADH6P28332 368 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 AGTR1P30556 359 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 ASMTP46597 345 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 PRIM2P49643 509 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 ATP5J2P56134 94 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 PDE7AQ13946 482 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 MFSD12Q6NUT3 480 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 FIGNL1Q6PIW4 674 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 SZRD1Q7Z422 152 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 R3HCC1LQ7Z5L2 792 aaKnown RBP19.22■□□□□ 0.67
CPNE1-220ENST00000458038 WFDC8Q8IUA0 241 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 LILRA2Q8N149 483 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 COX18Q8N8Q8 333 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 CPNE4Q96A23 557 aaPredicted RBP19.22■□□□□ 0.67
CPNE1-220ENST00000458038 KLHL15Q96M94 604 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 TRMOQ9BU70 441 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 BTBD2Q9BX70 525 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 PPCSQ9HAB8 311 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 DUSP22Q9NRW4 184 aa19.22■□□□□ 0.67
CPNE1-220ENST00000458038 CADP27708 2225 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 A0A1W2PPM1 405 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 MLC1Q15049 377 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 DUSP5Q16690 384 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 TMEM201Q5SNT2 666 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 LIPMQ5VYY2 423 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 LRIG3Q6UXM1 1119 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 GATSQ8NAP1 163 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 ZNF527Q8NB42 609 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 STACQ99469 402 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 TXLNGYQ9BZA5 131 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 HOXD1Q9GZZ0 328 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 TNFRSF12AQ9NP84 129 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 MID2Q9UJV3 735 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 FBN3Q75N90 2809 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 ABCA1O95477 2261 aa19.21■□□□□ 0.67
CPNE1-220ENST00000458038 INAFM1C9JVW0 142 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 AZIN1O14977 448 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 AKAP10O43572 662 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 PLAUP00749 431 aa19.2■□□□□ 0.66
CPNE1-220ENST00000458038 OPN1LWP04000 364 aa19.2■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms