RNA–Protein interactions for RNA: ENST00000456560.6

SEMA3B-209, Transcript of semaphorin 3B, humanhuman

TSL 1 (best) BASIC

Gene SEMA3B, Length 2,221 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-209ENST00000456560 HTR2AP28223 471 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 MAP3K8P41279 467 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 MXD1Q05195 221 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 ZNF155Q12901 538 aaPredicted RBP17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 ILF3Q12906 894 aaKnown RBP eCLIP17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 GPR50Q13585 617 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 ZNF517Q6ZMY9 492 aaPredicted RBP17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 LHFPL3Q86UP9 236 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 FAM181AQ8N9Y4 354 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 OR4F15Q8NGB8 312 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 SETD6Q8TBK2 473 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 SAMD8Q96LT4 415 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 KCTD7Q96MP8 289 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 CBLCQ9ULV8 474 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 MTCH2Q9Y6C9 303 aa17.08■□□□□ 0.33
SEMA3B-209ENST00000456560 TRAPPC13A5PLN9 417 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 CENPXA8MT69 81 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 A8MV72 311 aaPredicted RBP17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 SLC30A4O14863 429 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 IGHA1P01876 353 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 HMGN1P05114 100 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 HTR1FP30939 366 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 FGF9P31371 208 aaPredicted RBP17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 GABRA5P31644 462 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 UBE2IP63279 158 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 ZNF79Q15937 498 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 MANEAQ5SRI9 462 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 ARMC4Q5T2S8 1044 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 RANBP3LQ86VV4 465 aaPredicted RBP17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 RAB43Q86YS6 212 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 BBS1Q8NFJ9 593 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 OR2T33Q8NG76 320 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 OR5T3Q8NGG3 340 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 BRIX1Q8TDN6 353 aaKnown RBP17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 C1GALT1C1Q96EU7 318 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 STACQ99469 402 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 MIXL1Q9H2W2 232 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 CPNE7Q9UBL6 633 aa17.08■□□□□ 0.32
SEMA3B-209ENST00000456560 FAM221BA6H8Z2 402 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 SLC2A10O95528 541 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 LALBAP00709 142 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 IFI6P09912 130 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 ZGLP1P0C6A0 271 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 SDC2P34741 201 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 SLC9A3P48764 834 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 FABP5Q01469 135 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 HNRNPA0Q13151 305 aaKnown RBP17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 DSG2Q14126 1118 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 PRICKLE4Q2TBC4 344 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 CRTC2Q53ET0 693 aaPredicted RBP17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 ZCCHC12Q6PEW1 402 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 WDR88Q6ZMY6 472 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 SFTPA2Q8IWL1 248 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 CA13Q8N1Q1 262 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 ASCC1Q8N9N2 400 aaKnown RBP17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 CDRT4Q8N9R6 151 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 DMRTB1Q96MA1 342 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 JAM3Q9BX67 310 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 SRRQ9GZT4 340 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 UBQLN3Q9H347 655 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 POT1Q9NUX5 634 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 MAT2BQ9NZL9 334 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 PCDHGB2Q9Y5G2 931 aa17.07■□□□□ 0.32
SEMA3B-209ENST00000456560 A0A0J9YY10 115 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 TRDV1A0A1B0GX56 115 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 UNC119BA6NIH7 251 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 GALR3O60755 368 aaPredicted RBP17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 NID1P14543 1247 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 GABRG2P18507 467 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 NT5EP21589 574 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 ACSM1Q08AH1 577 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 OR1Q1Q15612 314 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 ZMAT1Q5H9K5 638 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 MRPL2Q5T653 305 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 OR13H1Q8NG92 308 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 RPLP0P6Q8NHW5 317 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 TM9SF2Q99805 663 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 TCEAL2Q9H3H9 227 aaPredicted RBP17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 KRCC1Q9NPI7 259 aaPredicted RBP17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 HINT3Q9NQE9 182 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 IL20RAQ9UHF4 553 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 SPACA6W5XKT8 324 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 SCN2AQ99250 2005 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 CDHR4A6H8M9 788 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 CENPBD1B2RD01 187 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 PEX12O00623 359 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 TNFP01375 233 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 GKN3PP0CG01 181 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 DDOSTP39656 456 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 FXYD6P3P58550 94 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 SHC2P98077 582 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 GLYR1Q49A26 553 aaPredicted RBP17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 HSDL2Q6YN16 418 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 PRR23CQ6ZRP0 262 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 ABI3BPQ7Z7G0 1075 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 RNF113BQ8IZP6 322 aaKnown RBP17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 SLC22A18ASQ8N1D0 253 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 COX18Q8N8Q8 333 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 ST6GAL2Q96JF0 529 aa17.06■□□□□ 0.32
SEMA3B-209ENST00000456560 DEPDC7Q96QD5 511 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms