RNA–Protein interactions for RNA: ENST00000456545.5

PDLIM2-215, Transcript of PDZ and LIM domain 2, humanhuman

TSL 5

Gene PDLIM2, Length 757 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-215ENST00000456545 KHKP50053 298 aa16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 IDH3AP50213 366 aa16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 POLR2JP52435 117 aaKnown RBP16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 AQP5P55064 265 aa16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 BCL2A1Q16548 175 aa16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 SAXO2Q658L1 398 aa16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 P4HA3Q7Z4N8 544 aa16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 MTERF4Q7Z6M4 381 aaKnown RBP16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 TNIP2Q8NFZ5 429 aa16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 SMPDL3BQ92485 455 aa16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 RAB8BQ92930 207 aa16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 NEURL3Q96EH8 262 aa16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 TUBA1CQ9BQE3 449 aa16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 INPP5KQ9BT40 448 aa16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 SDR39U1Q9NRG7 319 aaPredicted RBP16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 ZNF337Q9Y3M9 751 aa16.37■□□□□ 0.21
PDLIM2-215ENST00000456545 A0A087WZY1 265 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 OR2M5A3KFT3 312 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 DVL2O14641 736 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 KRT75O95678 551 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 LHX2P50458 406 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 HPCAP84074 193 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 ARHGAP11BQ3KRB8 267 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 GPAT3Q53EU6 434 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 HSP90B2PQ58FF3 399 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 ARSKQ6UWY0 536 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 CHDHQ8NE62 594 aaPredicted RBP16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 RFWD2Q8NHY2 731 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 MIPOL1Q8TD10 442 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 LRRC46Q96FV0 321 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 ITCHQ96J02 903 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 CCDC28BQ9BUN5 200 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 DTNAQ9Y4J8 743 aa16.36■□□□□ 0.21
PDLIM2-215ENST00000456545 FAM234BA2RU67 622 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 CLCA1A8K7I4 914 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 B4DXG7 233 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 C19orf84I3L1E1 186 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 SEC14L5O43304 696 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 ZNF708P17019 499 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 BMP5P22003 454 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 RNF144AP50876 292 aaPredicted RBP16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 B3GALT5-AS1P59052 145 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 SLC25A35Q3KQZ1 300 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 KLHL26Q53HC5 615 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 C6orf10Q5SRN2 563 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 MEX3BQ6ZN04 569 aaKnown RBP16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 SEM1Q6ZVN7 128 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 RNF130Q86XS8 419 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 GRAMD2AQ8IUY3 354 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 TMCO5AQ8N6Q1 288 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 TM9SF2Q99805 663 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 EBF4Q9BQW3 602 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 SERHL2Q9H4I8 314 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 MKLN1Q9UL63 735 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 CARD8Q9Y2G2 431 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 AP4B1Q9Y6B7 739 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 PCNX3Q9H6A9 2034 aa16.35■□□□□ 0.21
PDLIM2-215ENST00000456545 KDM4EB2RXH2 506 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 CYP7B1O75881 506 aa16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 TOXO94900 526 aa16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 CEACAM8P31997 349 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 CDKN2CP42773 168 aa16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 P2RX1P51575 399 aa16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 CLDN18P56856 261 aa16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 RPS3AP61247 264 aaKnown RBP16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 TXNL4AP83876 142 aaKnown RBP16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 CD226Q15762 336 aa16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 SGCBQ16585 318 aa16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 LIX1LQ8IVB5 337 aa16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 ARFGAP2Q8N6H7 521 aa16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 WNT2BQ93097 391 aa16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 ZBTB8AQ96BR9 441 aa16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 ROPN1LQ96C74 230 aa16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 THOC1Q96FV9 657 aaKnown RBP16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 ZNF629Q9UEG4 869 aaPredicted RBP16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 WDR45Q9Y484 360 aa16.34■□□□□ 0.21
PDLIM2-215ENST00000456545 MBD3L4A6NDZ8 208 aaPredicted RBP16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 MBD3L3A6NE82 208 aaPredicted RBP16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 MBD3L5A6NJ08 208 aaPredicted RBP16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 SHISA8B8ZZ34 492 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 ZNF264O43296 627 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 FCMRO60667 390 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 TMIGD3P0DMS9 266 aaPredicted RBP16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 UBL4AP11441 157 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 ME2P23368 584 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 CTSSP25774 331 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 OPRM1P35372 400 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 CCR4P51679 360 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 ZNF117Q03924 483 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 TIGD2Q4W5G0 525 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 PDZK1Q5T2W1 519 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 PPP4R4Q6NUP7 873 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 DNAJC14Q6Y2X3 702 aaPredicted RBP16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 MSANTD1Q6ZTZ1 278 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 MCEMP1Q8IX19 187 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 OR9I1Q8NGQ6 314 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 MBD3L2Q8NHZ7 208 aaPredicted RBP16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 PNPT1Q8TCS8 783 aaKnown RBP16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 VPS33AQ96AX1 596 aa16.33■□□□□ 0.2
PDLIM2-215ENST00000456545 NMUR2Q9GZQ4 415 aa16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms