RNA–Protein interactions for RNA: ENST00000451492.5

USP54-207, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 4

Gene USP54, Length 509 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-207ENST00000451492 WNT2BQ93097 391 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 COQ8BQ96D53 544 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 RNF145Q96MT1 663 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 STACQ99469 402 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 SFXN3Q9BWM7 321 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 POLDIP3Q9BY77 421 aaKnown RBP8.73□□□□□ -1.01
USP54-207ENST00000451492 PIGUQ9H490 435 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 SERHL2Q9H4I8 314 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 GPATCH2Q9NW75 528 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 GALNT8Q9NY28 637 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 NTMQ9P121 344 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 CLEC4AQ9UMR7 237 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 CARD8Q9Y2G2 431 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 MRPS18CQ9Y3D5 142 aaKnown RBP8.73□□□□□ -1.01
USP54-207ENST00000451492 ACTL7BQ9Y614 415 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 HEATR5AQ86XA9 2040 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 MYO9AB2RTY4 2548 aa8.73□□□□□ -1.01
USP54-207ENST00000451492 TUBAL3A6NHL2 446 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 GTPBP1O00178 669 aaKnown RBP8.72□□□□□ -1.01
USP54-207ENST00000451492 SYT5O00445 386 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 TNFSF11O14788 317 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 OIP5O43482 229 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 CYP7B1O75881 506 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 KRT16P08779 473 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 ALDOCP09972 364 aaKnown RBP8.72□□□□□ -1.01
USP54-207ENST00000451492 MATN1P21941 496 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 EPHA3P29320 983 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 SFTPDP35247 375 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 WDR4P57081 412 aaKnown RBP8.72□□□□□ -1.01
USP54-207ENST00000451492 RPS3AP61247 264 aaKnown RBP8.72□□□□□ -1.01
USP54-207ENST00000451492 FOXF1Q12946 379 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 GPR68Q15743 365 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 PLPPR5Q32ZL2 321 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 SPANXN4Q5MJ08 99 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 DDX59Q5T1V6 619 aaKnown RBP eCLIP8.72□□□□□ -1.01
USP54-207ENST00000451492 NXNQ6DKJ4 435 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 TNFAIP8L2Q6P589 184 aaPredicted RBP8.72□□□□□ -1.01
USP54-207ENST00000451492 C16orf62Q7Z3J2 963 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 C6orf120Q7Z4R8 191 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 HMGN2P46Q86SG4 172 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 CROCCP2Q86T23 111 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 LSRQ86X29 649 aaPredicted RBP8.72□□□□□ -1.01
USP54-207ENST00000451492 NATD1Q8N6N6 113 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 ATP6V1C2Q8NEY4 427 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 B4GALNT2Q8NHY0 566 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 FAM110BQ8TC76 370 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 MOAP1Q96BY2 351 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 ZFP3Q96NJ6 502 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 PRRG4Q9BZD6 226 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 OPN3Q9H1Y3 402 aaPredicted RBP8.72□□□□□ -1.01
USP54-207ENST00000451492 CLEC4MQ9H2X3 399 aaPredicted RBP8.72□□□□□ -1.01
USP54-207ENST00000451492 OR51I1Q9H343 314 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 ACBD3Q9H3P7 528 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 WDR55Q9H6Y2 383 aaPredicted RBP8.72□□□□□ -1.01
USP54-207ENST00000451492 MEAF6Q9HAF1 191 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 SLC24A3Q9HC58 644 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 UBQLN4Q9NRR5 601 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 DUSP22Q9NRW4 184 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 MED17Q9NVC6 651 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 ASIC5Q9NY37 505 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 NKIRAS1Q9NYS0 192 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 PACSIN3Q9UKS6 424 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 PCDHGB4Q9UN71 923 aa8.72□□□□□ -1.01
USP54-207ENST00000451492 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.72□□□□□ -1.01
USP54-207ENST00000451492 IGLV3-32A0A0A0MS00 114 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 CENPVL1A0A0U1RR11 272 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 A6NNC1 897 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 SDHDO14521 159 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 CXCL13O43927 109 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 PLGP00747 810 aaPredicted RBP8.71□□□□□ -1.02
USP54-207ENST00000451492 TUBBP07437 444 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 ZNF17P17021 662 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 CAPN3P20807 821 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 IL11P20809 199 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 ME2P23368 584 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 CHI3L1P36222 383 aaPredicted RBP8.71□□□□□ -1.02
USP54-207ENST00000451492 KCNJ5P48544 419 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 EEFSECP57772 596 aaKnown RBP8.71□□□□□ -1.02
USP54-207ENST00000451492 EXOC3L2Q2M3D2 409 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 FAM174BQ3ZCQ3 159 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 EXOSC6Q5RKV6 272 aaKnown RBP8.71□□□□□ -1.02
USP54-207ENST00000451492 PDZK1Q5T2W1 519 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 OR2A2Q6IF42 318 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 CBLN3Q6UW01 205 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 DNAJC14Q6Y2X3 702 aaPredicted RBP8.71□□□□□ -1.02
USP54-207ENST00000451492 CAMKMTQ7Z624 323 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 GGNQ86UU5 652 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 KIF18BQ86Y91 864 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 ZNF527Q8NB42 609 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 PSMA8Q8TAA3 256 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 RAB8BQ92930 207 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 TEX37Q96LM6 180 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 LIME1Q9H400 295 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 TMBIM4Q9HC24 238 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 FOXD3Q9UJU5 478 aaPredicted RBP8.71□□□□□ -1.02
USP54-207ENST00000451492 MKLN1Q9UL63 735 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 AP4B1Q9Y6B7 739 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 POLQO75417 2590 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 VPS13CQ709C8 3753 aa8.71□□□□□ -1.02
USP54-207ENST00000451492 MPDZO75970 2070 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms