RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 MAP2K5Q13163 448 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SLC10A1Q14973 349 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CEBPEQ15744 281 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 HSPB2Q16082 182 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 HLFQ16534 295 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MICBQ29980 383 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 C4orf17Q53FE4 359 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PRPF38BQ5VTL8 546 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 LIPJQ5W064 366 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 NSUN5P2Q63ZY6 315 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZNF585AQ6P3V2 769 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ENPP6Q6UWR7 440 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 BTNL3Q6UXE8 466 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TRILQ7L0X0 811 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 KANSL1Q7Z3B3 1105 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TMEM150AQ86TG1 271 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 RBM23Q86U06 439 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 PDZD3Q86UT5 571 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OSTM1Q86WC4 334 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 KIAA0319LQ8IZA0 1049 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ACBD7Q8N6N7 88 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 FRMD1Q8N878 549 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PNLDC1Q8NA58 520 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 C7orf57Q8NEG2 295 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR5D16Q8NGK9 328 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR14A16Q8NHC5 309 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZNF417Q8TAU3 575 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 M1APQ8TC57 530 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 C16orf78Q8WTQ4 265 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OIT3Q8WWZ8 545 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TVP23CQ96ET8 276 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TOE1Q96GM8 510 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 SLC35G5Q96KT7 338 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 LRR1Q96L50 414 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CASD1Q96PB1 797 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SORCS2Q96PQ0 1159 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PARK7Q99497 189 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 C2orf88Q9BSF0 95 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SYT11Q9BT88 431 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OPN3Q9H1Y3 402 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 VCX2Q9H322 139 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SEC61A2Q9H9S3 476 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 NMUR1Q9HB89 426 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ACP6Q9NPH0 428 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ACSS2Q9NR19 701 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 DLL4Q9NR61 685 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TFCP2L1Q9NZI6 479 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CBLCQ9ULV8 474 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 OR10H1Q9Y4A9 318 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 LTN1O94822 1766 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 DDX60Q8IY21 1712 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 NRCAMQ92823 1304 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ALS2Q96Q42 1657 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 A0A0G2JLW4 131 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 C13orf42A0A1B0GVH6 325 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MEIS3P1A6NDR6 274 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 POM121BA6NF01 834 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 C2CD4BA6NLJ0 364 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 UMAD1C9J7I0 102 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 M0R2N6 131 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MANBAO00462 879 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GABRPO00591 440 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 UBE2CO00762 179 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MATN3O15232 486 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TP73O15350 636 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GPR39O43194 453 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 KCNAB3O43448 404 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 NUDT21O43809 227 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 MFSD11O43934 449 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PCDH7O60245 1069 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PEX10O60683 326 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 EIF3GO75821 320 aaKnown RBP eCLIP2.08□□□□□ -2.08
USP53-202ENST00000450251 PSMD10O75832 226 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 BPNT1O95861 308 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 RENP00797 406 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 URODP06132 367 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 GLAP06280 429 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SYPP08247 313 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ZNF888P0CJ79 500 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 NME1P15531 152 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 NQO2P16083 231 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PCMT1P22061 227 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 LPOP22079 712 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 KDELR2P33947 212 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SLC11A2P49281 568 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TCTAP57738 103 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 MFGE8Q08431 387 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 MTM1Q13496 603 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 ITPK1Q13572 414 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CAPSQ13938 189 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 CLINT1Q14677 625 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 TTLL4Q14679 1199 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 HLXQ14774 488 aaPredicted RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 MFSD13AQ14CX5 517 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 VAMP3Q15836 100 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 SLC14A2Q15849 920 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 EML3Q32P44 896 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 PCGF3Q3KNV8 242 aa2.08□□□□□ -2.08
USP53-202ENST00000450251 EEF1AKMT2Q5JPI9 291 aaKnown RBP2.08□□□□□ -2.08
USP53-202ENST00000450251 C9orf64Q5T6V5 341 aa2.08□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms