RNA–Protein interactions for RNA: ENST00000449709.1

HMGB3P8-201, Transcript of high mobility group box 3 pseudogene 8, humanhuman

BASIC

Gene HMGB3P8, Length 577 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P8-201ENST00000449709 POPDC2Q9HBU9 364 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 EXOSC3Q9NQT5 275 aaKnown RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 SIRT7Q9NRC8 400 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 RXFP3Q9NSD7 469 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 C14orf105Q9NVL8 296 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 TMEM45AQ9NWC5 275 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 MTMR10Q9NXD2 777 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 NFKBIL1Q9UBC1 381 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 DHCR7Q9UBM7 475 aaKnown RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 FBXL2Q9UKC9 423 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 DNPEPQ9ULA0 475 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF490Q9ULM2 529 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 C19orf53Q9UNZ5 99 aaPredicted RBP3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 CA5BQ9Y2D0 317 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 PLEKHA6Q9Y2H5 1048 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 KCNIP3Q9Y2W7 256 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 GOLT1BQ9Y3E0 138 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 RAP2CQ9Y3L5 183 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 KCTD3Q9Y597 815 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 MTCH2Q9Y6C9 303 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 NRXN2Q9P2S2 1712 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 ASTN1O14525 1302 aa3.38□□□□□ -1.87
HMGB3P8-201ENST00000449709 LOC100506127A0A0U1RQW1 187 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 LOC100130705A0A1B0GUX0 176 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 LNP1A1A4G5 178 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SYNDIG1LA6NDD5 238 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR6C68A6NDL8 312 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 TMEM191CA6NGB0 347 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 C9orf118A6NHY6 69 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 IFITM10A6NMD0 228 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 HMSDA8MTL9 139 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ARHGEF33A8MVX0 844 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 A8MWP6 167 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 PROB1E7EW31 1015 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 G3V2L1 256 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SMLR1H3BR10 107 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 TEX46H3BTG2 121 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 J3KTA2 159 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SDHDO14521 159 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ARPC2O15144 300 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 CHADO15335 359 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC16A4O15374 487 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SIGLEC5O15389 551 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 TXNL1O43396 289 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 CHST10O43529 356 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 NUDT21O43809 227 aaKnown RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 XPNPEP2O43895 674 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 GPRIN2O60269 458 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 FADS1O60427 444 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 TRIM13O60858 407 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SMPD2O60906 423 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SRP72O76094 671 aaKnown RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 PROSCO94903 275 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 STBD1O95210 358 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 DIRAS3O95661 229 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 STARD3NLO95772 234 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 VIPP01282 170 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ALDOAP04075 364 aaKnown RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 HOXB5P09067 269 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 OR52Z1P0C646 297 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 HKR1P10072 659 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 NR2C1P13056 603 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 GABRA1P14867 456 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 UGT2B7P16662 529 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ADCYAP1P18509 176 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 HOXA5P20719 270 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 NR2F2P24468 414 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 TEAD1P28347 426 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 HTR1EP28566 365 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 HIBADHP31937 336 aaKnown RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 MPIP34949 423 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 TGFBR1P36897 503 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 MMP12P39900 470 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 IL15P40933 162 aaPredicted RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 MAP2K4P45985 399 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 OMPP47874 163 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 GCLMP48507 274 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ARSEP51690 589 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF134P52741 427 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 NAGLUP54802 743 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 EEFSECP57772 596 aaKnown RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 LILRA4P59901 499 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 RAB2AP61019 212 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 KHDRBS1Q07666 443 aaKnown RBP eCLIP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 GPS1Q13098 491 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SLC14A1Q13336 389 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 CDH18Q13634 790 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 KRT33BQ14525 404 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 MESDQ14696 234 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 FCN2Q15485 313 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 SMAD1Q15797 465 aaKnown RBP3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 TIMM50Q3ZCQ8 353 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 VPS26BQ4G0F5 336 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ACTBL2Q562R1 376 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF805Q5CZA5 627 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 ZNF628Q5EBL2 1059 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 TMEM255AQ5JRV8 349 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 GPRC6AQ5T6X5 926 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 LCN1P1Q5VSP4 162 aa3.37□□□□□ -1.87
HMGB3P8-201ENST00000449709 HACD4Q5VWC8 232 aa3.37□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms