RNA–Protein interactions for RNA: ENST00000448494.1

LINC00342-202, long intergenic non-protein coding RNA 342, humanhuman

TSL 2 BASIC

Gene LINC00342, Length 2,351 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00342-202ENST00000448494 CLMPQ9H6B4 373 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 WDCPQ9H6R7 721 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 TREM1Q9NP99 234 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 PARD6AQ9NPB6 346 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 RLIMQ9NVW2 624 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 NKIRAS2Q9NYR9 191 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 FLRT1Q9NZU1 646 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 TNFSF13BQ9Y275 285 aa10.07□□□□□ -0.8
LINC00342-202ENST00000448494 OR6C76A6NM76 312 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 FOXE1O00358 373 aaPredicted RBP10.06□□□□□ -0.8
LINC00342-202ENST00000448494 MAN2B1O00754 1011 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 KERAO60938 352 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 UBL3O95164 117 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 IL33O95760 270 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 ICAM1P05362 532 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 SRPRAP08240 638 aaKnown RBP10.06□□□□□ -0.8
LINC00342-202ENST00000448494 HOXB9P17482 250 aaPredicted RBP10.06□□□□□ -0.8
LINC00342-202ENST00000448494 CPT2P23786 658 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 ACKR3P25106 362 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 PPP2R1BP30154 601 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 AGTR1P30556 359 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 CD200P41217 278 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 MAGEB1P43366 347 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 RBX1P62877 108 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 PLA2G7Q13093 441 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 NKPD1Q17RQ9 610 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 SPANXN4Q5MJ08 99 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 C9orf64Q5T6V5 341 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 CDC73Q6P1J9 531 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 NHLRC1Q6VVB1 395 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 ZNF574Q6ZN55 896 aaPredicted RBP10.06□□□□□ -0.8
LINC00342-202ENST00000448494 C6orf120Q7Z4R8 191 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 VSIG10LQ86VR7 867 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 PTOV1Q86YD1 416 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 MARCH9Q86YJ5 346 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 PYROXD2Q8N2H3 581 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 MYLIPQ8WY64 445 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 TM4SF18Q96CE8 201 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 FOXRED1Q96CU9 486 aaPredicted RBP10.06□□□□□ -0.8
LINC00342-202ENST00000448494 TGM7Q96PF1 710 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 FDXACB1Q9BRP7 624 aaPredicted RBP10.06□□□□□ -0.8
LINC00342-202ENST00000448494 FAIM2Q9BWQ8 316 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 TSSK6Q9BXA6 273 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 BCO2Q9BYV7 579 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 DPY30Q9C005 99 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 HAPLN2Q9GZV7 340 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 ADAM19Q9H013 955 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 TMEM184CQ9NVA4 438 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 ZNF225Q9UK10 706 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 FZD10Q9ULW2 581 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 MOKQ9UQ07 419 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 GREB1LQ9C091 1923 aaPredicted RBP10.06□□□□□ -0.8
LINC00342-202ENST00000448494 KANTRA0A1W2PQU2 76 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 TMEM150BA6NC51 233 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 LRRN3E7EW58 273 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 F5H5P2 479 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 TLR4O00206 839 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 EREGO14944 169 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 CHST10O43529 356 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 DIRAS3O95661 229 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 WNT1P04628 370 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 GUSBP08236 651 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 SNRPCP09234 159 aaKnown RBP10.06□□□□□ -0.8
LINC00342-202ENST00000448494 CD3GP09693 182 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 ANKRD34CP0C6C1 535 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 BCKDHAP12694 445 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 ACHEP22303 614 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 F2RL1P55085 397 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 CDKN2DP55273 166 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 WNT3P56703 355 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 NRG1Q02297 640 aaPredicted RBP10.06□□□□□ -0.8
LINC00342-202ENST00000448494 SLC9A5Q14940 896 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 KCNMB1Q16558 191 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 OCLNQ16625 522 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 DCAF10Q5QP82 559 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 MFSD14BQ5SR56 506 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 IDNKQ5T6J7 187 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 ARMCX2Q7L311 632 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 OR6J1Q8NGC5 347 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 OR10A7Q8NGE5 316 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 NUDT8Q8WV74 236 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 KHSRPQ92945 711 aaKnown RBP eCLIP10.06□□□□□ -0.8
LINC00342-202ENST00000448494 NRIP2Q9BQI9 281 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 LRRN3Q9H3W5 708 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 GSX1Q9H4S2 264 aaPredicted RBP10.06□□□□□ -0.8
LINC00342-202ENST00000448494 POPDC3Q9HBV1 291 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 NMRK2Q9NPI5 230 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 MMP26Q9NRE1 261 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 NPFFR2Q9Y5X5 522 aa10.06□□□□□ -0.8
LINC00342-202ENST00000448494 DOCK1Q14185 1865 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 CCDC187A0A096LP49 1063 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 A0A1W2PPQ1 181 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 NDUFS8O00217 210 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 SMAD6O43541 496 aaKnown RBP10.05□□□□□ -0.8
LINC00342-202ENST00000448494 YIF1AO95070 293 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 NPSP0C0P6 89 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 EBLN1P0CF75 366 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 PRPS2P11908 318 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 HNF1AP20823 631 aa10.05□□□□□ -0.8
LINC00342-202ENST00000448494 PRDX3P30048 256 aaKnown RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms