RNA–Protein interactions for RNA: ENST00000446312.5

DDR1-238, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5 BASIC

Gene DDR1, Length 3,202 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-238	ENST00000446312		F8W036	122 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	MRPS14	O60783	128 aa	Known RBP	11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	SAG	P10523	405 aa	Predicted RBP	11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	CSF2RA	P15509	400 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	ZNF3	P17036	446 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	BSG	P35613	385 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	HMGA2	P52926	109 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	RAB33A	Q14088	237 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	NTRK2	Q16620	822 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	HDDC2	Q7Z4H3	204 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	CEACAM19	Q7Z692	300 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	CCDC36	Q8IYA8	594 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	RDH10	Q8IZV5	341 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	TBC1D19	Q8N5T2	526 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	SLC16A11	Q8NCK7	471 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	SGK3	Q96BR1	496 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	ZNF689	Q96CS4	500 aa	Predicted RBP	11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	NEURL3	Q96EH8	262 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	SLC38A2	Q96QD8	506 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	MICU1	Q9BPX6	476 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	AIF1L	Q9BQI0	150 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	SLC25A18	Q9H1K4	315 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	FN3K	Q9H479	309 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	SYNPO2L	Q9H987	977 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	FKRP	Q9H9S5	495 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	LHX9	Q9NQ69	397 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	SLC7A7	Q9UM01	511 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	NCKAP1	Q9Y2A7	1128 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	AK6	Q9Y3D8	172 aa	Known RBP	11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	OTOL1	A6NHN0	477 aa	Predicted RBP	11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	ORC5	O43913	435 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	UGDH	O60701	494 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	SLC22A5	O76082	557 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	UBE2M	P61081	183 aa	Known RBP	11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	DGCR2	P98153	550 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	TP53I3	Q53FA7	332 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	SLC36A4	Q6YBV0	504 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	CREB3L2	Q70SY1	520 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	AMZ2	Q86W34	360 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	FRMD1	Q8N878	549 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	C17orf47	Q8NEP4	570 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	OVCA2	Q8WZ82	227 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	OR5P2	Q8WZ92	322 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	PMM1	Q92871	262 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	ABHD1	Q96SE0	405 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	THAP7	Q9BT49	309 aa	Predicted RBP	11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	SLC6A15	Q9H2J7	730 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	AHSP	Q9NZD4	102 aa		11.71	□□□□□ -0.53
DDR1-238	ENST00000446312	NOTCH4	Q99466	2003 aa		11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	CHURC1-FNTB	B4DL54	471 aa		11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	IL1A	P01583	271 aa		11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	HOXD4	P09016	255 aa	Predicted RBP	11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	CPE	P16870	476 aa		11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	PDX1	P52945	283 aa		11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	OR12D2	P58182	307 aa		11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	SNRPG	P62308	76 aa	Known RBP	11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	MAB21L1	Q13394	359 aa		11.71	□□□□□ -0.54
DDR1-238	ENST00000446312		Q3ZCU0	254 aa		11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	BOLL	Q8N9W6	283 aa	Known RBP	11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	CNRIP1	Q96F85	164 aa	Predicted RBP	11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	SLC39A1	Q9NY26	324 aa		11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	OR6C2	Q9NZP2	312 aa		11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	SRRD	Q9UH36	339 aa		11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	MKL2	Q9ULH7	1088 aa		11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	CA5B	Q9Y2D0	317 aa		11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	PCDHGA9	Q9Y5G4	932 aa	Known RBP	11.71	□□□□□ -0.54
DDR1-238	ENST00000446312	DAPL1	A0PJW8	107 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	UBXN7	O94888	489 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	SOD1	P00441	154 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	HSD3B2	P26439	372 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	RRAS2	P62070	204 aa	Predicted RBP	11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	BTN3A2	P78410	334 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	KHDRBS1	Q07666	443 aa	Known RBP eCLIP	11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	FUT5	Q11128	374 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	TPGS2	Q68CL5	300 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	C19orf48	Q6RUI8	117 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	TMEM91	Q6ZNR0	172 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	SLC39A11	Q8N1S5	342 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	GDPD1	Q8N9F7	314 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	GOT1L1	Q8NHS2	421 aa	Predicted RBP	11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	AMDHD1	Q96NU7	426 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	ZCCHC2	Q9C0B9	1178 aa	Known RBP	11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	SEMA4C	Q9C0C4	833 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	MS4A7	Q9GZW8	240 aa	Predicted RBP	11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	AUNIP	Q9H7T9	357 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	C20orf141	Q9NUB4	165 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	PLCL2	Q9UPR0	1127 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	BRWD1	Q9NSI6	2320 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	IQCM	A0A1B0GVH7	501 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312		A0A1W2PR48	441 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	MEIS3P1	A6NDR6	274 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	TBC1D3B	A6NDS4	549 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	PRODH	O43272	600 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	HOXA2	O43364	376 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	APOC1	P02654	83 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	FGB	P02675	491 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	UCHL1	P09936	223 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	ACP2	P11117	423 aa		11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	APEH	P13798	732 aa	Known RBP	11.7	□□□□□ -0.54
DDR1-238	ENST00000446312	MMP12	P39900	470 aa		11.7	□□□□□ -0.54

Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms