RNA–Protein interactions for RNA: ENST00000439369.6

SCLT1-202, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCLT1, Length 966 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-202ENST00000439369 NRF1Q16656 503 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 DUSP7Q16829 419 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 FAM98BQ52LJ0 330 aaKnown RBP11.61□□□□□ -0.55
SCLT1-202ENST00000439369 IFI44LQ53G44 452 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 MRPL2Q5T653 305 aaKnown RBP11.61□□□□□ -0.55
SCLT1-202ENST00000439369 APOOLQ6UXV4 268 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 ZNF836Q6ZNA1 936 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 ZNF550Q7Z398 422 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 SPATA24Q86W54 205 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 ZADH2Q8N4Q0 377 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 ZNF614Q8N883 585 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 PSD4Q8NDX1 1056 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 GPR32P1Q8NGA4 272 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 OR5M3Q8NGP4 307 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 TMEM41AQ96HV5 264 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 POLR2J2Q9GZM3 115 aaKnown RBP11.61□□□□□ -0.55
SCLT1-202ENST00000439369 POLR2J3Q9H1A7 115 aaKnown RBP11.61□□□□□ -0.55
SCLT1-202ENST00000439369 PRORYQ9H606 182 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 KLRF1Q9NZS2 232 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 FLRT3Q9NZU0 649 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 ANAPC2Q9UJX6 822 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 KLF13Q9Y2Y9 288 aaPredicted RBP11.61□□□□□ -0.55
SCLT1-202ENST00000439369 WIF1Q9Y5W5 379 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 DOCK10Q96BY6 2186 aa11.61□□□□□ -0.55
SCLT1-202ENST00000439369 TRAV17A0A0B4J275 112 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 CENPVL1A0A0U1RR11 272 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 DHRS12A0PJE2 317 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 GTPBP1O00178 669 aaKnown RBP11.6□□□□□ -0.55
SCLT1-202ENST00000439369 FAAHO00519 579 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 ZNF264O43296 627 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 NME2P1O60361 137 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 TPST1O60507 370 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 FMO6PO60774 539 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 SLC25A12O75746 678 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 PRKD3O94806 890 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 ANGPTL1O95841 491 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 OPN1SWP03999 348 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 CCL3P10147 92 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 UQCRBP14927 111 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 CNR1P21554 472 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 NME2P22392 152 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 ELAVL4P26378 380 aaKnown RBP11.6□□□□□ -0.55
SCLT1-202ENST00000439369 PTGDSP41222 190 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 SLC6A8P48029 635 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 TNFSF10P50591 281 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 SKP2Q13309 424 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 CCNIQ14094 377 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 KPNB1Q14974 876 aaKnown RBP11.6□□□□□ -0.55
SCLT1-202ENST00000439369 DESI1Q6ICB0 168 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 ZFP1Q6P2D0 407 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 FKBP9P1Q75LS8 142 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 MARCH3Q86UD3 253 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 PACS2Q86VP3 889 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 SMYD1Q8NB12 490 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 TMEM178AQ8NBL3 297 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 PAPD5Q8NDF8 572 aaKnown RBP11.6□□□□□ -0.55
SCLT1-202ENST00000439369 PHOSPHO1Q8TCT1 267 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 NR4A3Q92570 626 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 ARSGQ96EG1 525 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 SCMH1Q96GD3 660 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 RSRC1Q96IZ7 334 aaKnown RBP11.6□□□□□ -0.55
SCLT1-202ENST00000439369 TPD52L3Q96J77 140 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 HSH2DQ96JZ2 352 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 C5orf34Q96MH7 638 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 ARHGDIGQ99819 225 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 FAM173AQ9BQD7 235 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 LAT2Q9GZY6 243 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 DENND2DQ9H6A0 471 aaPredicted RBP11.6□□□□□ -0.55
SCLT1-202ENST00000439369 YY1AP1Q9H869 796 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 DNAJB12Q9NXW2 375 aaKnown RBP11.6□□□□□ -0.55
SCLT1-202ENST00000439369 ZMIZ1Q9ULJ6 1067 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 CHST2Q9Y4C5 530 aa11.6□□□□□ -0.55
SCLT1-202ENST00000439369 WDFY3Q8IZQ1 3526 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 ANKRD65E5RJM6 399 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 SCO2O43819 266 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 DPM1O60762 260 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 TRIM3O75382 744 aaPredicted RBP11.59□□□□□ -0.55
SCLT1-202ENST00000439369 EPPINO95925 133 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 SEMG1P04279 462 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 IFNW1P05000 195 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 SP1P08047 785 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 RAP2AP10114 183 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 ITGA2P17301 1181 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 SLC7A1P30825 629 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 RGS8P57771 180 aaPredicted RBP11.59□□□□□ -0.55
SCLT1-202ENST00000439369 CHRNB3Q05901 458 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 KCNAB2Q13303 367 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 CD226Q15762 336 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 SLC25A25Q6KCM7 469 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 ENPP6Q6UWR7 440 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 PIWIL3Q7Z3Z3 882 aaKnown RBP11.59□□□□□ -0.55
SCLT1-202ENST00000439369 MDGA2Q7Z553 956 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 RANBP3LQ86VV4 465 aaPredicted RBP11.59□□□□□ -0.55
SCLT1-202ENST00000439369 ADGRG5Q8IZF4 528 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 CLIP4Q8N3C7 705 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 CNOT9Q92600 299 aaKnown RBP11.59□□□□□ -0.55
SCLT1-202ENST00000439369 EXTL1Q92935 676 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 SLC47A1Q96FL8 570 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 ZNF597Q96LX8 424 aa11.59□□□□□ -0.55
SCLT1-202ENST00000439369 SIGLEC12Q96PQ1 595 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 158.7 ms