RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SFTPCP11686 197 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 CALML3P27482 149 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 SPRP35270 261 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 CASP9P55211 416 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 KLF5Q13887 457 aaPredicted RBP2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 IGFBP7Q16270 282 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 C9orf66Q5T8R8 295 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 FHL5Q5TD97 284 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 DDI2Q5TDH0 399 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 NKAIN2Q5VXU1 208 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 LIPJQ5W064 366 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 RABEPKQ7Z6M1 372 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 GVQW1Q8N7I0 195 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 POM121L12Q8N7R1 296 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 C4orf32Q8N8J7 132 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 LEMD2Q8NC56 503 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 OR52E1Q8NGJ3 308 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 OR4F5Q8NH21 305 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 EXOC6Q8TAG9 804 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 GOLGA5Q8TBA6 731 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 FBXO25Q8TCJ0 367 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 SLCO4A1Q96BD0 722 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 EEF2KMTQ96G04 330 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 GPR137Q96N19 417 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 RUFY1Q96T51 708 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 HSD17B14Q9BPX1 270 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 ZBP1Q9H171 429 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 ABCG8Q9H221 673 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 TNMDQ9H2S6 317 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 TMEM245Q9H330 911 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 CWH43Q9H720 699 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 IL1RL2Q9HB29 575 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 SLC38A10Q9HBR0 1119 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 ADGRL4Q9HBW9 690 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 SYTL2Q9HCH5 934 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 IKZF3Q9UKT9 509 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 RARRES3Q9UL19 164 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 SLC6A5Q9Y345 797 aa2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 ZNFX1Q9P2E3 1918 aaKnown RBP2.59□□□□□ -1.99
HMGB3P12-201ENST00000438745 COL12A1Q99715 3063 aa2.59□□□□□ -2
HMGB3P12-201ENST00000438745 PLXNA4Q9HCM2 1894 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 MYH2Q9UKX2 1941 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 DNHD1Q96M86 4753 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 LRRK2Q5S007 2527 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 IGKV6D-41A0A0C4DH26 115 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 A8MU10 97 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 HAS3O00219 553 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 LRRTM2O43300 516 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 TXNL1O43396 289 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 ZBTB14O43829 449 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 SYNGR4O95473 234 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 SEMA4FO95754 770 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 IGHG1P01857 330 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 CHRNA1P02708 482 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 MT-ND1P03886 318 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 HOXD4P09016 255 aaPredicted RBP2.58□□□□□ -2
HMGB3P12-201ENST00000438745 GNSP15586 552 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 IL4RP24394 825 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 GDI1P31150 447 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 HMGCLP35914 325 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 ALDH3B1P43353 468 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 TNFRSF4P43489 277 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 RAG2P55895 527 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 DYNLL1P63167 89 aaKnown RBP2.58□□□□□ -2
HMGB3P12-201ENST00000438745 CCZ1BP86790 482 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 CCZ1P86791 482 aaPredicted RBP2.58□□□□□ -2
HMGB3P12-201ENST00000438745 KLRC3Q07444 240 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 WASHC5Q12768 1159 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 TSTA3Q13630 321 aaPredicted RBP2.58□□□□□ -2
HMGB3P12-201ENST00000438745 CYLC2Q14093 348 aaPredicted RBP2.58□□□□□ -2
HMGB3P12-201ENST00000438745 CLPPQ16740 277 aaPredicted RBP2.58□□□□□ -2
HMGB3P12-201ENST00000438745 USH1GQ495M9 461 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 AGAP7PQ5VUJ5 663 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 HIST2H2AA3Q6FI13 130 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 RAB12Q6IQ22 244 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 CLEC18BQ6UXF7 455 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 DLEU7Q6UYE1 221 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 WDR88Q6ZMY6 472 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 ASRGL1Q7L266 308 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 LPCAT2Q7L5N7 544 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 BATF2Q8N1L9 274 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 SLC39A11Q8N1S5 342 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP2.58□□□□□ -2
HMGB3P12-201ENST00000438745 PPTC7Q8NI37 304 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 KIAA1524Q8TCG1 905 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 FGF13Q92913 245 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 TOMM40LQ969M1 308 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 PNPLA2Q96AD5 504 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 MSANTD3Q96H12 275 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 TMEM237Q96Q45 408 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 PLEKHF1Q96S99 279 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 XPO4Q9C0E2 1151 aaKnown RBP2.58□□□□□ -2
HMGB3P12-201ENST00000438745 TMEM117Q9H0C3 514 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 RNF41Q9H4P4 317 aaPredicted RBP2.58□□□□□ -2
HMGB3P12-201ENST00000438745 DCTPP1Q9H773 170 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 ELL3Q9HB65 397 aaPredicted RBP2.58□□□□□ -2
HMGB3P12-201ENST00000438745 VPS54Q9P1Q0 977 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 TSPAN16Q9UKR8 245 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 CCPG1Q9ULG6 757 aa2.58□□□□□ -2
HMGB3P12-201ENST00000438745 TP53TG3Q9ULZ0 132 aa2.58□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms