RNA–Protein interactions for RNA: ENST00000436601.1

LSM3P3-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 3, humanhuman

BASIC

Gene LSM3P3, Length 306 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P3-201ENST00000436601 NPIPA8P0DM63 369 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 UMPSP11172 480 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 RPS4Y1P22090 263 aaKnown RBP6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 SLC7A1P30825 629 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 RFX3P48380 749 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 KCNJ5P48544 419 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 KCNJ10P78508 379 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 ATP1A4Q13733 1029 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 GPR68Q15743 365 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 MAPK14Q16539 360 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 CPEB4Q17RY0 729 aaKnown RBP eCLIP6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 GLIPR1L2Q4G1C9 344 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 IQCCQ4KMZ1 466 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 ATP1A1-AS1Q5TC04 95 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 HLA-DQA1Q5Y7H0 255 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 TCTN3Q6NUS6 607 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 AAGABQ6PD74 315 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 TSEN54Q7Z6J9 526 aaKnown RBP6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 VTCN1Q7Z7D3 282 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 KRT73Q86Y46 540 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 RAB43Q86YS6 212 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 ARMC8Q8IUR7 673 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 PRR22Q8IZ63 422 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 ZNF619Q8N2I2 560 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 SMYD1Q8NB12 490 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 GPR32P1Q8NGA4 272 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 OR5L2Q8NGL0 311 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 OR4C3Q8NH37 302 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 OR52P1PQ8NH57 321 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 PMM1Q92871 262 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 STMN2Q93045 179 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 TMBIM1Q969X1 311 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 KIAA1143Q96AT1 154 aaPredicted RBP6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 HSPBAP1Q96EW2 488 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 PYURFQ96I23 114 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 RSRC1Q96IZ7 334 aaKnown RBP6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 TPD52L3Q96J77 140 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 ZNF607Q96SK3 696 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 SEPHS2Q99611 448 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 WFDC6Q9BQY6 131 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 DOHHQ9BU89 302 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 CHID1Q9BWS9 393 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 POLE3Q9NRF9 147 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 ARMC1Q9NVT9 282 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 ADPRHL2Q9NX46 363 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 FLRT3Q9NZU0 649 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 MYOTQ9UBF9 498 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 NKX1-2Q9UD57 310 aaPredicted RBP6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 ANAPC2Q9UJX6 822 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 RPS6KA6Q9UK32 745 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 SAMD4AQ9UPU9 718 aaKnown RBP6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 WDR45Q9Y484 360 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 OR10H1Q9Y4A9 318 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 CHST2Q9Y4C5 530 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 SPEF1Q9Y4P9 236 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 AP4S1Q9Y587 144 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 CUL9Q8IWT3 2517 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 SCN3AQ9NY46 2000 aa6.47□□□□□ -1.37
LSM3P3-201ENST00000436601 EP300Q09472 2414 aaPredicted RBP6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 CLDN24A6NM45 220 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 H0Y3Z8 333 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 ACOX3O15254 700 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 NKX2-8O15522 239 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 TLX3O43711 291 aaPredicted RBP6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 KIAA0513O60268 411 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 UGT2B17O75795 530 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 OR2J2O76002 312 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 PDE9AO76083 593 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 ATP6V1G2O95670 118 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 MT-ND1P03886 318 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 ALPPP05187 535 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 SERPINA7P05543 415 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 PABPC4LP0CB38 370 aaKnown RBP6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 ITGAMP11215 1152 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 ICAM2P13598 275 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 TNFRSF1BP20333 461 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 PSMA4P25789 261 aaKnown RBP6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 ABCD3P28288 659 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 EEF1A1P68104 462 aaKnown RBP6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 HPCAP84074 193 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 RCN1Q15293 331 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 ZNF141Q15928 474 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 DECR1Q16698 335 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 FLYWCH1Q4VC44 716 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 FAM98BQ52LJ0 330 aaKnown RBP6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 ZNF311Q5JNZ3 666 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 IRAK1BP1Q5VVH5 260 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 H3F3CQ6NXT2 135 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 ZFP1Q6P2D0 407 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 BEND4Q6ZU67 534 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 LHFPL2Q6ZUX7 228 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 VRK2Q86Y07 508 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 C10orf67Q8IYJ2 551 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 SLC34A3Q8N130 599 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 LILRA2Q8N149 483 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 CLIP4Q8N3C7 705 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 MFSD4AQ8N468 514 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 OR4D11Q8NGI4 311 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 SPPL2AQ8TCT8 520 aa6.46□□□□□ -1.38
LSM3P3-201ENST00000436601 APOBEC4Q8WW27 367 aaKnown RBP6.46□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms