RNA–Protein interactions for RNA: ENST00000434046.6

SYNPO2-203, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,588 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-203ENST00000434046 TBC1D3CQ6IPX1 549 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TCTN3Q6NUS6 607 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 RFLNAQ6ZTI6 216 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TBC1D3Q8IZP1 549 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 ZNF687Q8N1G0 1237 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 STPG2Q8N412 459 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 HORMAD2Q8N7B1 307 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 L3MBTL4Q8NA19 623 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 C1orf216Q8TAB5 229 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 FANK1Q8TC84 345 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 UBTD2Q8WUN7 234 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC38A5Q8WUX1 472 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 SCMH1Q96GD3 660 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 ZNF514Q96K75 400 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 PDCD10Q9BUL8 212 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 BHLHE41Q9C0J9 482 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TMEM168Q9H0V1 697 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 C20orf85Q9H1P6 137 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TRIM36Q9NQ86 728 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 PHPT1Q9NRX4 125 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 MBD2Q9UBB5 411 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 KIF25Q9UIL4 384 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 SDK1Q7Z5N4 2213 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TMEM129A0AVI4 362 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TRABD2BA6NFA1 517 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 RB1P06400 928 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 HK1P19367 917 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 RBMS1P29558 406 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 GDNFP39905 211 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC6A11P48066 632 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 NDUFA9Q16795 377 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 LRRC37A5PQ49AS3 106 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 SLC22A10Q63ZE4 541 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 SFXN4Q6P4A7 337 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TMEM91Q6ZNR0 172 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TECPR1Q7Z6L1 1165 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 CPOQ8IVL8 374 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 MMP21Q8N119 569 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 HDDC3Q8N4P3 179 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 FAM26EQ8N5C1 309 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 OR52H1Q8NGJ2 320 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 OR14C36Q8NHC7 312 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 PIGXQ8TBF5 258 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 ZDHHC1Q8WTX9 485 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TADA1Q96BN2 335 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 EID2BQ96D98 161 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 MS4A3Q96HJ5 214 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 LRIG1Q96JA1 1093 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 BBS4Q96RK4 519 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 NPAS1Q99742 590 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 VN1R3Q9BXE9 311 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 MCOLN1Q9GZU1 580 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 HEXA-AS1Q9H8Q6 139 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 C1GALT1Q9NS00 363 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 ZCCHC3Q9NUD5 404 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 HS3ST2Q9Y278 367 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 CHST2Q9Y4C5 530 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 ARID1AO14497 2285 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 EDDM13A0A1B0GTR0 161 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 C1orf226A1L170 272 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 FFAR1O14842 300 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 PI15O43692 258 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 PRAMEF4O60810 478 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 ATG12O94817 140 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 WDPCPO95876 746 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 ECDO95905 644 aaPredicted RBP6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 LIMS3P0CW19 117 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 LIMS4P0CW20 117 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 GSTM3P21266 225 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 MAOBP27338 520 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 S100A11P31949 105 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 PYCR1P32322 319 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 AHRP35869 848 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 LBX1P52954 281 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 PUM1Q14671 1186 aaKnown RBP eCLIP6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TCTN1Q2MV58 587 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 METTL11BQ5VVY1 283 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 PRAMEF9Q5VWM5 478 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 FAAP20Q6NZ36 180 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 PLBD1Q6P4A8 553 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 ZCCHC12Q6PEW1 402 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 C6orf120Q7Z4R8 191 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 ZER1Q7Z7L7 766 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 AMZ2Q86W34 360 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 PM20D2Q8IYS1 436 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 SPAG16Q8N0X2 631 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TRAM1L1Q8N609 369 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 ACBD7Q8N6N7 88 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TMEM185AQ8NFB2 350 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 OR5D16Q8NGK9 328 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 PTP4A1Q93096 173 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 KLHL15Q96M94 604 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 ARHGAP9Q9BRR9 750 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 FAIM2Q9BWQ8 316 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 AUNIPQ9H7T9 357 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 TAS2R10Q9NYW0 307 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 MARK1Q9P0L2 795 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 AK6Q9Y3D8 172 aaKnown RBP6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 HCFC2Q9Y5Z7 792 aa6.94□□□□□ -1.3
SYNPO2-203ENST00000434046 CACNA1CQ13936 2221 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms