RNA–Protein interactions for RNA: ENST00000431390.5

HMGN1-206, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 1,552 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-206ENST00000431390 SDCCAG3Q96C92 435 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 NRBF2Q96F24 287 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 WFDC6Q9BQY6 131 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 COQ10BQ9H8M1 238 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 RYDENQ9NUL5 291 aaKnown RBP16.77■□□□□ 0.28
HMGN1-206ENST00000431390 MYOTQ9UBF9 498 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 ACAD8Q9UKU7 415 aa16.77■□□□□ 0.28
HMGN1-206ENST00000431390 OR6C70A6NIJ9 312 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 CLDN24A6NM45 220 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 G3V2T6 193 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 HS6ST1O60243 411 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 ABCB7O75027 752 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 NGFRP08138 427 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 LIPCP11150 499 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 NAGAP17050 411 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 FPR1P21462 350 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 TBXA2RP21731 343 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 ARHGDIAP52565 204 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 RGS8P57771 180 aaPredicted RBP16.77■□□□□ 0.27
HMGN1-206ENST00000431390 SHQ1Q6PI26 577 aaKnown RBP16.77■□□□□ 0.27
HMGN1-206ENST00000431390 IZUMO2Q6UXV1 221 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 DEF8Q6ZN54 512 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 RBM45Q8IUH3 476 aaKnown RBP16.77■□□□□ 0.27
HMGN1-206ENST00000431390 PRR22Q8IZ63 422 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 OR4C3Q8NH37 302 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 ADOQ96SZ5 270 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 ZNF160Q9HCG1 818 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 RLIMQ9NVW2 624 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 VNN3Q9NY84 501 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 SAMHD1Q9Y3Z3 626 aaKnown RBP16.77■□□□□ 0.27
HMGN1-206ENST00000431390 NPFFR2Q9Y5X5 522 aa16.77■□□□□ 0.27
HMGN1-206ENST00000431390 ATMQ13315 3056 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 ZNF462Q96JM2 2506 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 H0YJX3 145 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 J3KTA2 159 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 ERVH48-1M5A8F1 160 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 RASAL1O95294 804 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 UTS2O95399 124 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 NADKO95544 446 aaPredicted RBP16.76■□□□□ 0.27
HMGN1-206ENST00000431390 CYP4B1P13584 511 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 ADH7P40394 386 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 YAP1P46937 504 aaKnown RBP16.76■□□□□ 0.27
HMGN1-206ENST00000431390 IST1P53990 364 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 SPIBQ01892 262 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 IL10RAQ13651 578 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 NPTX1Q15818 432 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 KLHL26Q53HC5 615 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 MRGPREQ86SM8 312 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 KBTBD2Q8IY47 623 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 CBR4Q8N4T8 237 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 SLC15A4Q8N697 577 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 ZNF614Q8N883 585 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 ZNF248Q8NDW4 579 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 SLC22A8Q8TCC7 542 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 PHF10Q8WUB8 498 aaKnown RBP16.76■□□□□ 0.27
HMGN1-206ENST00000431390 KIAA1143Q96AT1 154 aaPredicted RBP16.76■□□□□ 0.27
HMGN1-206ENST00000431390 DHRS1Q96LJ7 313 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 PRRC1Q96M27 445 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 IP6K3Q96PC2 410 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 ZNF184Q99676 751 aaPredicted RBP16.76■□□□□ 0.27
HMGN1-206ENST00000431390 SLC29A1Q99808 456 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 LIN28AQ9H9Z2 209 aaKnown RBP16.76■□□□□ 0.27
HMGN1-206ENST00000431390 FBXL4Q9UKA2 621 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 SLC35A3Q9Y2D2 325 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 TESMINQ9Y4I5 508 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 LYVE1Q9Y5Y7 322 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 U3KQV3 271 aa16.76■□□□□ 0.27
HMGN1-206ENST00000431390 SERINC4A6NH21 518 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 PDLIM1O00151 329 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 TNFRSF11BO00300 401 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 SCDO00767 359 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 SOCS2O14508 198 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 AP3D1O14617 1153 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 SEMA7AO75326 666 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 PPM1BO75688 479 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 OXSR1O95747 527 aaPredicted RBP16.75■□□□□ 0.27
HMGN1-206ENST00000431390 HPGDP15428 266 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 HMGA2P52926 109 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 SMIM11AP58511 58 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 EFR3AQ14156 821 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 COLEC12Q5KU26 742 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 TMEM179BQ7Z7N9 219 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 RANBP3LQ86VV4 465 aaPredicted RBP16.75■□□□□ 0.27
HMGN1-206ENST00000431390 ADAMTS17Q8TE56 1095 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 THAP3Q8WTV1 239 aaPredicted RBP16.75■□□□□ 0.27
HMGN1-206ENST00000431390 OSBPL10Q9BXB5 764 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 POLR2J2Q9GZM3 115 aaKnown RBP16.75■□□□□ 0.27
HMGN1-206ENST00000431390 GABARAPL1Q9H0R8 117 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 POLR2J3Q9H1A7 115 aaKnown RBP16.75■□□□□ 0.27
HMGN1-206ENST00000431390 GPN2Q9H9Y4 310 aaPredicted RBP16.75■□□□□ 0.27
HMGN1-206ENST00000431390 CPNE5Q9HCH3 593 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 ACER3Q9NUN7 267 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 P4HTMQ9NXG6 502 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 A4GNTQ9UNA3 340 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 COL6A6A6NMZ7 2263 aa16.75■□□□□ 0.27
HMGN1-206ENST00000431390 AHCTF1Q8WYP5 2266 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 A0A1W2PQD3 144 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 J3QKU1 62 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 WWP2O00308 870 aa16.74■□□□□ 0.27
HMGN1-206ENST00000431390 FFAR1O14842 300 aa16.74■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms