RNA–Protein interactions for RNA: ENST00000430547.5

NUP50-208, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 537 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-208ENST00000430547 GPATCH2Q9NW75 528 aa15.87■□□□□ 0.13
NUP50-208ENST00000430547 NKIRAS1Q9NYS0 192 aa15.87■□□□□ 0.13
NUP50-208ENST00000430547 PACSIN3Q9UKS6 424 aa15.87■□□□□ 0.13
NUP50-208ENST00000430547 OTOGQ6ZRI0 2925 aa15.87■□□□□ 0.13
NUP50-208ENST00000430547 RNASET2O00584 256 aaKnown RBP15.86■□□□□ 0.13
NUP50-208ENST00000430547 TNFRSF21O75509 655 aa15.86■□□□□ 0.13
NUP50-208ENST00000430547 TGM6O95932 706 aa15.86■□□□□ 0.13
NUP50-208ENST00000430547 CLNS1AP54105 237 aaKnown RBP15.86■□□□□ 0.13
NUP50-208ENST00000430547 SORDQ00796 357 aa15.86■□□□□ 0.13
NUP50-208ENST00000430547 FBXW10Q5XX13 1052 aa15.86■□□□□ 0.13
NUP50-208ENST00000430547 ATG16L1Q676U5 607 aa15.86■□□□□ 0.13
NUP50-208ENST00000430547 PPP4R4Q6NUP7 873 aa15.86■□□□□ 0.13
NUP50-208ENST00000430547 CLECL1Q8IZS7 167 aa15.86■□□□□ 0.13
NUP50-208ENST00000430547 ZNF614Q8N883 585 aa15.86■□□□□ 0.13
NUP50-208ENST00000430547 CNEP1R1Q8N9A8 125 aa15.86■□□□□ 0.13
NUP50-208ENST00000430547 B4GALNT2Q8NHY0 566 aa15.86■□□□□ 0.13
NUP50-208ENST00000430547 PHOSPHO1Q8TCT1 267 aa15.86■□□□□ 0.13
NUP50-208ENST00000430547 ACTRT2Q8TDY3 377 aa15.86■□□□□ 0.13
NUP50-208ENST00000430547 MEAF6Q9HAF1 191 aa15.86■□□□□ 0.13
NUP50-208ENST00000430547 PNPOQ9NVS9 261 aa15.86■□□□□ 0.13
NUP50-208ENST00000430547 DNAJB12Q9NXW2 375 aaKnown RBP15.86■□□□□ 0.13
NUP50-208ENST00000430547 JKAMPQ9P055 326 aa15.86■□□□□ 0.13
NUP50-208ENST00000430547 CCDC168Q8NDH2 2452 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 UQCRHLA0A096LP55 91 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 RNF103-CHMP3A0A140T963 221 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 A0A1W2PNV4 684 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 DUXAA6NLW8 204 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 SHISA8B8ZZ34 492 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 H0YC42 278 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 NUDT14O95848 222 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 CRHP06850 196 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 FCGR2AP12318 317 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 ME2P23368 584 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 CPOXP36551 454 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 SUCLG1P53597 346 aaKnown RBP15.85■□□□□ 0.13
NUP50-208ENST00000430547 TPD52P55327 224 aaPredicted RBP15.85■□□□□ 0.13
NUP50-208ENST00000430547 CLDN20P56880 219 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 MAGOHP61326 146 aaKnown RBP15.85■□□□□ 0.13
NUP50-208ENST00000430547 PON3Q15166 354 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 DPY19L1Q2PZI1 675 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 ANXA8L1Q5VT79 327 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 MTERF4Q7Z6M4 381 aaKnown RBP15.85■□□□□ 0.13
NUP50-208ENST00000430547 WDR75Q8IWA0 830 aaKnown RBP15.85■□□□□ 0.13
NUP50-208ENST00000430547 OR8J2Q8NGG1 315 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 OR5D16Q8NGK9 328 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 SLC35G5Q96KT7 338 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 OR7D2Q96RA2 312 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 POLDIP3Q9BY77 421 aaKnown RBP15.85■□□□□ 0.13
NUP50-208ENST00000430547 PRRG4Q9BZD6 226 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 THAP1Q9NVV9 213 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 ZNF175Q9Y473 711 aa15.85■□□□□ 0.13
NUP50-208ENST00000430547 TRPC5OSA6NMA1 111 aa15.84■□□□□ 0.13
NUP50-208ENST00000430547 GTPBP1O00178 669 aaKnown RBP15.84■□□□□ 0.13
NUP50-208ENST00000430547 EIF1AYO14602 144 aaKnown RBP15.84■□□□□ 0.13
NUP50-208ENST00000430547 CTAG2O75638 210 aa15.84■□□□□ 0.13
NUP50-208ENST00000430547 SMNDC1O75940 238 aaKnown RBP eCLIP15.84■□□□□ 0.13
NUP50-208ENST00000430547 MATN1P21941 496 aa15.84■□□□□ 0.13
NUP50-208ENST00000430547 CLDN15P56746 228 aa15.84■□□□□ 0.13
NUP50-208ENST00000430547 RPS26P62854 115 aaKnown RBP15.84■□□□□ 0.13
NUP50-208ENST00000430547 CD226Q15762 336 aa15.84■□□□□ 0.13
NUP50-208ENST00000430547 PLPPR5Q32ZL2 321 aa15.84■□□□□ 0.13
NUP50-208ENST00000430547 C6orf120Q7Z4R8 191 aa15.84■□□□□ 0.13
NUP50-208ENST00000430547 GTPBP8Q8N3Z3 284 aaPredicted RBP15.84■□□□□ 0.13
NUP50-208ENST00000430547 METTL25Q8N6Q8 603 aa15.84■□□□□ 0.13
NUP50-208ENST00000430547 FNDC9Q8TBE3 224 aa15.84■□□□□ 0.13
NUP50-208ENST00000430547 FIG4Q92562 907 aa15.84■□□□□ 0.13
NUP50-208ENST00000430547 TESCQ96BS2 214 aa15.84■□□□□ 0.13
NUP50-208ENST00000430547 GPATCH1Q9BRR8 931 aaKnown RBP15.84■□□□□ 0.13
NUP50-208ENST00000430547 MED17Q9NVC6 651 aa15.84■□□□□ 0.13
NUP50-208ENST00000430547 GALNT8Q9NY28 637 aa15.84■□□□□ 0.13
NUP50-208ENST00000430547 KCNE3Q9Y6H6 103 aa15.84■□□□□ 0.13
NUP50-208ENST00000430547 NPIPA5A0A0B4J1W7 369 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 PRSS51A0A1B0GVH4 220 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 C7orf72A4D263 438 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 A6NNC1 897 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 NPIPA7E9PJI5 369 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 CPSF4O95639 269 aaKnown RBP15.83■□□□□ 0.12
NUP50-208ENST00000430547 AK1P00568 194 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 NPIPA8P0DM63 369 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 KITP10721 976 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 EIF1AXP47813 144 aaKnown RBP15.83■□□□□ 0.12
NUP50-208ENST00000430547 SLC18A1P54219 525 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 ATP12AP54707 1039 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 WDR4P57081 412 aaKnown RBP15.83■□□□□ 0.12
NUP50-208ENST00000430547 SIRPAP78324 504 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 OCRLQ01968 901 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 ZNF117Q03924 483 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 FGFBP1Q14512 234 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 TMEM44Q2T9K0 475 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 OGFOD2Q6N063 350 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 C16orf62Q7Z3J2 963 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 ANKRD46Q86W74 232 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 TMCO5AQ8N6Q1 288 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 RAB3IL1Q8TBN0 382 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 ZNF845Q96IR2 970 aaPredicted RBP15.83■□□□□ 0.12
NUP50-208ENST00000430547 RNF145Q96MT1 663 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 CLEC4MQ9H2X3 399 aaPredicted RBP15.83■□□□□ 0.12
NUP50-208ENST00000430547 EXD2Q9NVH0 621 aa15.83■□□□□ 0.12
NUP50-208ENST00000430547 PAQR5Q9NXK6 330 aaPredicted RBP15.83■□□□□ 0.12
NUP50-208ENST00000430547 MARCOQ9UEW3 520 aaPredicted RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms