RNA–Protein interactions for RNA: ENST00000429846.1

MSH5-208, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-208ENST00000429846 UBQLN4Q9NRR5 601 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 MED17Q9NVC6 651 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 SH3BP4Q9P0V3 963 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 PTGDR2Q9Y5Y4 395 aa13.34□□□□□ -0.27
MSH5-208ENST00000429846 ROS1P08922 2347 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP13.33□□□□□ -0.28
MSH5-208ENST00000429846 H7C1Q1 480 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 LSM1O15116 133 aaKnown RBP13.33□□□□□ -0.28
MSH5-208ENST00000429846 TUBBP07437 444 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 ALOX5P09917 674 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 PABPC4LP0CB38 370 aaKnown RBP13.33□□□□□ -0.28
MSH5-208ENST00000429846 ACP2P11117 423 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 PAX1P15863 534 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 PSMA4P25789 261 aaKnown RBP13.33□□□□□ -0.28
MSH5-208ENST00000429846 ELK4P28324 431 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 RPL3P39023 403 aaKnown RBP13.33□□□□□ -0.28
MSH5-208ENST00000429846 EIF1P41567 113 aaKnown RBP13.33□□□□□ -0.28
MSH5-208ENST00000429846 SLC6A8P48029 635 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 PRIM2P49643 509 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 RPL38P63173 70 aaKnown RBP13.33□□□□□ -0.28
MSH5-208ENST00000429846 MLC1Q15049 377 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 DUSP5Q16690 384 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 CPTPQ5TA50 214 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 KANK2Q63ZY3 851 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 LRIG3Q6UXM1 1119 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 Q6ZSR9 355 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 C22orf34Q6ZV56 151 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 PLEKHM3Q6ZWE6 761 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 TRABD2AQ86V40 505 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 EXOC3L1Q86VI1 746 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 COX18Q8N8Q8 333 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 OR2T11Q8NH01 316 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 OR2V1Q8NHB1 315 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 PERPQ96FX8 193 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 RNF145Q96MT1 663 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 RHOXF2Q9BQY4 288 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 DUSP22Q9NRW4 184 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 GIN1Q9NXP7 522 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 GPR52Q9Y2T5 361 aa13.33□□□□□ -0.28
MSH5-208ENST00000429846 TMEM114B3SHH9 223 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 TNFSF11O14788 317 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 AKAP10O43572 662 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 CXCL13O43927 109 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 LY6G6DO95868 133 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 THBDP07204 575 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 KRT4P19013 534 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 PSMB1P20618 241 aaKnown RBP13.32□□□□□ -0.28
MSH5-208ENST00000429846 PTH2RP49190 550 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 PCLAFQ15004 111 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 RFTN2Q52LD8 501 aaPredicted RBP13.32□□□□□ -0.28
MSH5-208ENST00000429846 EXOSC6Q5RKV6 272 aaKnown RBP13.32□□□□□ -0.28
MSH5-208ENST00000429846 ANKRD34AQ69YU3 496 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 HBMQ6B0K9 141 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 FIGNL1Q6PIW4 674 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 MTERF4Q7Z6M4 381 aaKnown RBP13.32□□□□□ -0.28
MSH5-208ENST00000429846 GALNT10Q86SR1 603 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 GATSQ8NAP1 163 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 B4GALNT2Q8NHY0 566 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 FBXO30Q8TB52 745 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 TMEM171Q8WVE6 324 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 IGFBPL1Q8WX77 278 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 JADE3Q92613 823 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 KLHL15Q96M94 604 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 STACQ99469 402 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 TUBB1Q9H4B7 451 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 CXorf56Q9H5V9 222 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 ZCCHC3Q9NUD5 404 aaKnown RBP13.32□□□□□ -0.28
MSH5-208ENST00000429846 CLEC4AQ9UMR7 237 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 FIS1Q9Y3D6 152 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 DNAJC15Q9Y5T4 150 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 TLN2Q9Y4G6 2542 aa13.32□□□□□ -0.28
MSH5-208ENST00000429846 HIVEP2P31629 2446 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 KLF4O43474 513 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 TRIM13O60858 407 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 SOX30O94993 753 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 SHBGP04278 402 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 ADH6P28332 368 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 MAPK1P28482 360 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 AGTR1P30556 359 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 HPCAL1P37235 193 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 SUMO3P55854 103 aaPredicted RBP13.31□□□□□ -0.28
MSH5-208ENST00000429846 POU6F2P78424 691 aaPredicted RBP13.31□□□□□ -0.28
MSH5-208ENST00000429846 ZNF239Q16600 458 aaKnown RBP13.31□□□□□ -0.28
MSH5-208ENST00000429846 GALNTL6Q49A17 601 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 ZNF704Q6ZNC4 412 aaPredicted RBP13.31□□□□□ -0.28
MSH5-208ENST00000429846 ZAR1Q86SH2 424 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 C10orf107Q8IVU9 208 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 ZNF527Q8NB42 609 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 CLHC1Q8NHS4 586 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 RNF128Q8TEB7 428 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 NUDT8Q8WV74 236 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 UBLCP1Q8WVY7 318 aaPredicted RBP13.31□□□□□ -0.28
MSH5-208ENST00000429846 CPNE4Q96A23 557 aaPredicted RBP13.31□□□□□ -0.28
MSH5-208ENST00000429846 FAM120BQ96EK7 910 aaKnown RBP13.31□□□□□ -0.28
MSH5-208ENST00000429846 SH3YL1Q96HL8 342 aaPredicted RBP13.31□□□□□ -0.28
MSH5-208ENST00000429846 REXO5Q96IC2 774 aaKnown RBP13.31□□□□□ -0.28
MSH5-208ENST00000429846 NPAS1Q99742 590 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 GATA5Q9BWX5 397 aaPredicted RBP13.31□□□□□ -0.28
MSH5-208ENST00000429846 BTBD2Q9BX70 525 aa13.31□□□□□ -0.28
MSH5-208ENST00000429846 ACTR6Q9GZN1 396 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms