RNA–Protein interactions for RNA: ENST00000429595.1

PTPRK-211, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 3

Gene PTPRK, Length 558 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-211ENST00000429595 UGT1A7Q9HAW7 530 aa5.63□□□□□ -1.51
PTPRK-211ENST00000429595 UGT1A10Q9HAW8 530 aa5.63□□□□□ -1.51
PTPRK-211ENST00000429595 UGT1A8Q9HAW9 530 aa5.63□□□□□ -1.51
PTPRK-211ENST00000429595 POPDC3Q9HBV1 291 aa5.63□□□□□ -1.51
PTPRK-211ENST00000429595 S100A14Q9HCY8 104 aa5.63□□□□□ -1.51
PTPRK-211ENST00000429595 MKKSQ9NPJ1 570 aaPredicted RBP5.63□□□□□ -1.51
PTPRK-211ENST00000429595 FBXO6Q9NRD1 293 aaPredicted RBP5.63□□□□□ -1.51
PTPRK-211ENST00000429595 TREX1Q9NSU2 369 aa5.63□□□□□ -1.51
PTPRK-211ENST00000429595 GAR1Q9NY12 217 aaKnown RBP5.63□□□□□ -1.51
PTPRK-211ENST00000429595 ZNF226Q9NYT6 803 aa5.63□□□□□ -1.51
PTPRK-211ENST00000429595 C6orf203Q9P0P8 240 aaPredicted RBP5.63□□□□□ -1.51
PTPRK-211ENST00000429595 KLHL8Q9P2G9 620 aaPredicted RBP5.63□□□□□ -1.51
PTPRK-211ENST00000429595 SLC7A8Q9UHI5 535 aa5.63□□□□□ -1.51
PTPRK-211ENST00000429595 ACOT9Q9Y305 439 aa5.63□□□□□ -1.51
PTPRK-211ENST00000429595 SEC23IPQ9Y6Y8 1000 aaKnown RBP5.63□□□□□ -1.51
PTPRK-211ENST00000429595 PHF3Q92576 2039 aaKnown RBP5.63□□□□□ -1.51
PTPRK-211ENST00000429595 IGHV3-20A0A0C4DH32 117 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 FAM166BA8MTA8 275 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 M0R3H8 397 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 SLC16A5O15375 505 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 DENRO43583 198 aaKnown RBP5.62□□□□□ -1.51
PTPRK-211ENST00000429595 BUD23O43709 281 aaKnown RBP5.62□□□□□ -1.51
PTPRK-211ENST00000429595 ITM2AO43736 263 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 SRPX2O60687 465 aaPredicted RBP5.62□□□□□ -1.51
PTPRK-211ENST00000429595 SOX30O94993 753 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 FGF4P08620 206 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 RPSAP08865 295 aaKnown RBP5.62□□□□□ -1.51
PTPRK-211ENST00000429595 RBP1P09455 135 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 COX4I1P13073 169 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 TNFRSF1BP20333 461 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 HLCSP50747 726 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 ATP4BP51164 291 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 ACVR1Q04771 509 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 TRAP1Q12931 704 aaKnown RBP5.62□□□□□ -1.51
PTPRK-211ENST00000429595 THOC5Q13769 683 aaKnown RBP5.62□□□□□ -1.51
PTPRK-211ENST00000429595 RCN2Q14257 317 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 CAPRIN1Q14444 709 aaKnown RBP5.62□□□□□ -1.51
PTPRK-211ENST00000429595 SEMA3AQ14563 771 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 RCN1Q15293 331 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 ATP13A5Q4VNC0 1218 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 CASC4Q6P4E1 433 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 TMEM205Q6UW68 189 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 SDCCAG8Q86SQ7 713 aaPredicted RBP5.62□□□□□ -1.51
PTPRK-211ENST00000429595 ZBTB46Q86UZ6 589 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 SLC22A16Q86VW1 577 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 SLC22A9Q8IVM8 553 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 C10orf107Q8IVU9 208 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 RFLNBQ8N5W9 214 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP5.62□□□□□ -1.51
PTPRK-211ENST00000429595 OR52K1Q8NGK4 314 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 SLC22A8Q8TCC7 542 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 WIPF2Q8TF74 440 aaPredicted RBP5.62□□□□□ -1.51
PTPRK-211ENST00000429595 WDR60Q8WVS4 1066 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 VPS39Q96JC1 886 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 TSNARE1Q96NA8 513 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 GPR78Q96P69 363 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 PANX3Q96QZ0 392 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 FAM167BQ9BTA0 163 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 GATA5Q9BWX5 397 aaPredicted RBP5.62□□□□□ -1.51
PTPRK-211ENST00000429595 SLC25A51Q9H1U9 297 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 ASB8Q9H765 288 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 COG4Q9H9E3 785 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 EFCAB1Q9HAE3 211 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 NMRK1Q9NWW6 199 aa5.62□□□□□ -1.51
PTPRK-211ENST00000429595 TDRKHQ9Y2W6 561 aaKnown RBP5.62□□□□□ -1.51
PTPRK-211ENST00000429595 IGLV3-12A0A075B6K2 115 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 LOC285095A0A1B0GVY8 99 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 C2orf81A6NN90 581 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 AHCYL1O43865 530 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 LMX1BO60663 402 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 DYSFO75923 2080 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 WISP3O95389 354 aaPredicted RBP5.61□□□□□ -1.51
PTPRK-211ENST00000429595 ENO1P06733 434 aaKnown RBP5.61□□□□□ -1.51
PTPRK-211ENST00000429595 TMIGD3P0DMS9 266 aaPredicted RBP5.61□□□□□ -1.51
PTPRK-211ENST00000429595 PF4V1P10720 104 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 PAX1P15863 534 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 MAGP20916 626 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 CALRP27797 417 aaKnown RBP5.61□□□□□ -1.51
PTPRK-211ENST00000429595 OPRM1P35372 400 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 HSPA13P48723 471 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 CASP9P55211 416 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 RAB10P61026 200 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 STX5Q13190 355 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 ITGA9Q13797 1035 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 IHHQ14623 411 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 KIR2DS3Q14952 304 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 SF3B4Q15427 424 aaKnown RBP eCLIP5.61□□□□□ -1.51
PTPRK-211ENST00000429595 MAPRE2Q15555 327 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 MINDY4Q4G0A6 757 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 HSP90AA5PQ58FG0 334 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 COQ5Q5HYK3 327 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 ZDHHC20Q5W0Z9 365 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 CYB5R2Q6BCY4 276 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 OR52E8Q6IFG1 317 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 NBEAL2Q6ZNJ1 2754 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 COLCA1Q6ZS62 124 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 SPARTQ8N0X7 666 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 PGAM4Q8N0Y7 254 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 TMEM156Q8N614 296 aa5.61□□□□□ -1.51
PTPRK-211ENST00000429595 LRRC17Q8N6Y2 441 aa5.61□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms