RNA–Protein interactions for RNA: ENST00000427926.5

CLTCL1-202, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-202ENST00000427926 SLC6A16Q9GZN6 736 aa9.36□□□□□ -0.91
CLTCL1-202ENST00000427926 DHCR7Q9UBM7 475 aaKnown RBP9.36□□□□□ -0.91
CLTCL1-202ENST00000427926 MMP17Q9ULZ9 603 aa9.36□□□□□ -0.91
CLTCL1-202ENST00000427926 ADAMTS5Q9UNA0 930 aa9.36□□□□□ -0.91
CLTCL1-202ENST00000427926 LOXL2Q9Y4K0 774 aa9.36□□□□□ -0.91
CLTCL1-202ENST00000427926 C4BP0C0L5 1744 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 C5P01031 1676 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 SLC22A1O15245 554 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 APOL3O95236 402 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 ITGB2P05107 769 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 SLC35E2BP0CK96 405 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 CKMT2P17540 419 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 DPP4P27487 766 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 IRS1P35568 1242 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 SPEM2Q0P670 501 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 ZNF704Q6ZNC4 412 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 CCDC71LQ8N9Z2 235 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 OR13H1Q8NG92 308 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 ZNF775Q96BV0 537 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 FCRL3Q96P31 734 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 PHB2Q99623 299 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 DPH2Q9BQC3 489 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 OPA3Q9H6K4 179 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 POLE4Q9NR33 117 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 UBQLN4Q9NRR5 601 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 QPCTLQ9NXS2 382 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 THAP10Q9P2Z0 257 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 SMIM30A4D0T7 59 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 CENPBD1B2RD01 187 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 SERPINA5P05154 406 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 RAD52P43351 418 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 HTR5AP47898 357 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 CARD18P57730 90 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 GNB2P62879 340 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 SLC36A2Q495M3 483 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 CCDC28AQ8IWP9 274 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 LILRB2Q8N423 598 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 CHFRQ96EP1 664 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 VSX1Q9NZR4 365 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 ZMAT5Q9UDW3 170 aaKnown RBP9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 KLF11O14901 512 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 IFNA1P01562 189 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 GNAO1P09471 354 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 FUT1P19526 365 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 SMAD2Q15796 467 aaKnown RBP9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 MSS51Q4VC12 460 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 HAGHLQ6PII5 290 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 MOB3CQ70IA8 216 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 SLC46A3Q7Z3Q1 461 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 PACRGLQ8N7B6 248 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 OR5H2Q8NGV7 314 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 TSPEARQ8WU66 669 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 ZDHHC16Q969W1 377 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 TREM1Q9NP99 234 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 MEPEQ9NQ76 525 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 DMRT3Q9NQL9 472 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 NPIPA5A0A0B4J1W7 369 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 SOBPA7XYQ1 873 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 FAM166BA8MTA8 275 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 NPIPA7E9PJI5 369 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 TSPAN4O14817 238 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 NPIPA8P0DM63 369 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 IL3RAP26951 378 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 HOXD9P28356 352 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 S100A2P29034 98 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 IL2RGP31785 369 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 CSNK1DP48730 415 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 GPX6P59796 221 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 ZNF92Q03936 586 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 APOFQ13790 326 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 PCLAFQ15004 111 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 NIPAL3Q6P499 406 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 TMEM173Q86WV6 379 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 RELL1Q8IUW5 271 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 KLHDC9Q8NEP7 349 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 IL1F10Q8WWZ1 152 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 INSM2Q96T92 566 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 MED18Q9BUE0 208 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 C1GALT1Q9NS00 363 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 KLHL42Q9P2K6 505 aa9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 NKX1-2Q9UD57 310 aaPredicted RBP9.35□□□□□ -0.91
CLTCL1-202ENST00000427926 FIGNL2A6NMB9 653 aa9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 UGDHO60701 494 aa9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 CRYBA1P05813 215 aa9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 EPHA1P21709 976 aa9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 ENPP1P22413 925 aa9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 CTSCP53634 463 aa9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 AQP4P55087 323 aa9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 RAB38P57729 211 aa9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 POU3F1Q03052 451 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 ATXN7L3Q14CW9 347 aaPredicted RBP9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 SAMD12Q8N8I0 201 aa9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 OR5AK2Q8NH90 309 aa9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 PIGCQ92535 297 aa9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 MSI2Q96DH6 328 aaKnown RBP9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 WACQ9BTA9 647 aa9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 POTEKPQ9BYX7 375 aa9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 DCSTAMPQ9H295 470 aa9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 CDCP1Q9H5V8 836 aa9.34□□□□□ -0.91
CLTCL1-202ENST00000427926 C12orf49Q9H741 205 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms