RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 DPY19L1Q2PZI1 675 aa18.67■□□□□ 0.58
HSPG2-205ENST00000427897 PLXDC2Q6UX71 529 aa18.67■□□□□ 0.58
HSPG2-205ENST00000427897 ZAR1Q86SH2 424 aa18.67■□□□□ 0.58
HSPG2-205ENST00000427897 GCNT2Q8N0V5 402 aa18.67■□□□□ 0.58
HSPG2-205ENST00000427897 OR8J2Q8NGG1 315 aa18.67■□□□□ 0.58
HSPG2-205ENST00000427897 B4GALNT2Q8NHY0 566 aa18.67■□□□□ 0.58
HSPG2-205ENST00000427897 ZBTB18Q99592 522 aa18.67■□□□□ 0.58
HSPG2-205ENST00000427897 SFXN3Q9BWM7 321 aa18.67■□□□□ 0.58
HSPG2-205ENST00000427897 PRRG4Q9BZD6 226 aa18.67■□□□□ 0.58
HSPG2-205ENST00000427897 AP4B1Q9Y6B7 739 aa18.67■□□□□ 0.58
HSPG2-205ENST00000427897 GOLGA8QA0A0J9YX86 632 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 A0A1W2PQD3 144 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 GOLGA8OA6NCC3 632 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 SLC22A20A6NK97 555 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 B4DXG7 233 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 GOLGA8NF8WBI6 632 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 HCRTR2O43614 444 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 ME2P23368 584 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 CHI3L1P36222 383 aaPredicted RBP18.66■□□□□ 0.58
HSPG2-205ENST00000427897 ATAD3BQ5T9A4 648 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 FBXW10Q5XX13 1052 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 MTERF4Q7Z6M4 381 aaKnown RBP18.66■□□□□ 0.58
HSPG2-205ENST00000427897 LUZP2Q86TE4 346 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 ANKRD46Q86W74 232 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 OR5D16Q8NGK9 328 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 TESCQ96BS2 214 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 UCN2Q96RP3 112 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 PINK1Q9BXM7 581 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 EXD2Q9NVH0 621 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 GPATCH2Q9NW75 528 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 ITGB1BP2Q9UKP3 347 aa18.66■□□□□ 0.58
HSPG2-205ENST00000427897 E9PBE3 544 aa18.65■□□□□ 0.58
HSPG2-205ENST00000427897 TNFRSF21O75509 655 aa18.65■□□□□ 0.58
HSPG2-205ENST00000427897 AGR2O95994 175 aa18.65■□□□□ 0.58
HSPG2-205ENST00000427897 FOXF2Q12947 444 aa18.65■□□□□ 0.58
HSPG2-205ENST00000427897 C16orf62Q7Z3J2 963 aa18.65■□□□□ 0.58
HSPG2-205ENST00000427897 WDR75Q8IWA0 830 aaKnown RBP18.65■□□□□ 0.58
HSPG2-205ENST00000427897 ZZZ3Q8IYH5 903 aa18.65■□□□□ 0.58
HSPG2-205ENST00000427897 CLEC4FQ8N1N0 589 aa18.65■□□□□ 0.58
HSPG2-205ENST00000427897 CNEP1R1Q8N9A8 125 aa18.65■□□□□ 0.58
HSPG2-205ENST00000427897 ACTRT2Q8TDY3 377 aa18.65■□□□□ 0.58
HSPG2-205ENST00000427897 ZBTB8AQ96BR9 441 aa18.65■□□□□ 0.58
HSPG2-205ENST00000427897 RBM24Q9BX46 236 aaKnown RBP18.65■□□□□ 0.58
HSPG2-205ENST00000427897 PIGMQ9H3S5 423 aa18.65■□□□□ 0.58
HSPG2-205ENST00000427897 WDR55Q9H6Y2 383 aaPredicted RBP18.65■□□□□ 0.58
HSPG2-205ENST00000427897 CLCF1Q9UBD9 225 aa18.65■□□□□ 0.58
HSPG2-205ENST00000427897 L3MBTL1Q9Y468 752 aa18.65■□□□□ 0.58
HSPG2-205ENST00000427897 KCNE3Q9Y6H6 103 aa18.65■□□□□ 0.58
HSPG2-205ENST00000427897 KIAA1549Q9HCM3 1950 aa18.64■□□□□ 0.58
HSPG2-205ENST00000427897 NPIPA5A0A0B4J1W7 369 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 SHISA8B8ZZ34 492 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 NPIPA7E9PJI5 369 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 SDHDO14521 159 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 EIF1AYO14602 144 aaKnown RBP18.64■□□□□ 0.57
HSPG2-205ENST00000427897 SMNDC1O75940 238 aaKnown RBP eCLIP18.64■□□□□ 0.57
HSPG2-205ENST00000427897 AK1P00568 194 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 NPIPA8P0DM63 369 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 UQCRC2P22695 453 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 EPHA3P29320 983 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 ATP12AP54707 1039 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 CLDN15P56746 228 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 CLDN20P56880 219 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 RPS26P62854 115 aaKnown RBP18.64■□□□□ 0.57
HSPG2-205ENST00000427897 GPR68Q15743 365 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 FAM174BQ3ZCQ3 159 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 FBXL19-AS1Q494R0 122 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 SPANXN4Q5MJ08 99 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 EXOSC6Q5RKV6 272 aaKnown RBP18.64■□□□□ 0.57
HSPG2-205ENST00000427897 PDSS1Q5T2R2 415 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 OGFOD2Q6N063 350 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 POMZP3Q6PJE2 187 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 ADGRE4PQ86SQ3 457 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 LURAP1LQ8IV03 231 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 RFWD2Q8NHY2 731 aa18.64■□□□□ 0.57
HSPG2-205ENST00000427897 TUBAL3A6NHL2 446 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 SNNO75324 88 aaPredicted RBP18.63■□□□□ 0.57
HSPG2-205ENST00000427897 STX11O75558 287 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 TGM6O95932 706 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 ZNF17P17021 662 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 EIF1AXP47813 144 aaKnown RBP18.63■□□□□ 0.57
HSPG2-205ENST00000427897 RNF144AP50876 292 aaPredicted RBP18.63■□□□□ 0.57
HSPG2-205ENST00000427897 SUCLG1P53597 346 aaKnown RBP18.63■□□□□ 0.57
HSPG2-205ENST00000427897 CASP9P55211 416 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 UFM1P61960 85 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 ARFGAP2Q8N6H7 521 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 TMCO5AQ8N6Q1 288 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 TRIML2Q8N7C3 387 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 DYDC1Q8WWB3 177 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 XAGE5Q8WWM1 108 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 RNF145Q96MT1 663 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 SDF2Q99470 211 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 OR51I1Q9H343 314 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 MED17Q9NVC6 651 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 AIG1Q9NVV5 245 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 PAQR5Q9NXK6 330 aaPredicted RBP18.63■□□□□ 0.57
HSPG2-205ENST00000427897 CARD8Q9Y2G2 431 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 DTNAQ9Y4J8 743 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 TEX15Q9BXT5 2789 aa18.63■□□□□ 0.57
HSPG2-205ENST00000427897 INTS1Q8N201 2190 aaKnown RBP18.62■□□□□ 0.57
HSPG2-205ENST00000427897 PKDREJQ9NTG1 2253 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms