RNA–Protein interactions for RNA: ENST00000426542.6

ARHGEF28-203, Transcript of Rho guanine nucleotide exchange factor 28, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene ARHGEF28, Length 6,118 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF28-203ENST00000426542 DCNP07585 359 aaKnown RBP16.9■□□□□ 0.3
ARHGEF28-203ENST00000426542 FGF4P08620 206 aa16.9■□□□□ 0.3
ARHGEF28-203ENST00000426542 ETV5P41161 510 aa16.9■□□□□ 0.3
ARHGEF28-203ENST00000426542 KIR2DS3Q14952 304 aa16.9■□□□□ 0.3
ARHGEF28-203ENST00000426542 SGPP2Q8IWX5 399 aa16.9■□□□□ 0.3
ARHGEF28-203ENST00000426542 ZNF681Q96N22 645 aa16.9■□□□□ 0.3
ARHGEF28-203ENST00000426542 KLF16Q9BXK1 252 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF28-203ENST00000426542 TEX10Q9NXF1 929 aaPredicted RBP16.9■□□□□ 0.3
ARHGEF28-203ENST00000426542 DNAJB6O75190 326 aa16.9■□□□□ 0.3
ARHGEF28-203ENST00000426542 OPN1LWP04000 364 aa16.9■□□□□ 0.3
ARHGEF28-203ENST00000426542 PRSS21Q9Y6M0 314 aa16.9■□□□□ 0.3
ARHGEF28-203ENST00000426542 SLC22A5O76082 557 aa16.89■□□□□ 0.3
ARHGEF28-203ENST00000426542 IVDP26440 423 aa16.89■□□□□ 0.3
ARHGEF28-203ENST00000426542 XCR1P46094 333 aa16.89■□□□□ 0.3
ARHGEF28-203ENST00000426542 EEF1A1P68104 462 aaKnown RBP16.89■□□□□ 0.3
ARHGEF28-203ENST00000426542 GLO1Q04760 184 aa16.89■□□□□ 0.3
ARHGEF28-203ENST00000426542 EXOSC7Q15024 291 aaKnown RBP16.89■□□□□ 0.3
ARHGEF28-203ENST00000426542 ARL6IP1Q15041 203 aa16.89■□□□□ 0.3
ARHGEF28-203ENST00000426542 P2RY14Q15391 338 aa16.89■□□□□ 0.3
ARHGEF28-203ENST00000426542 DNAJB11Q9UBS4 358 aa16.89■□□□□ 0.3
ARHGEF28-203ENST00000426542 CCDC163A0A0D9SF12 145 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 BMP4P12644 408 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 HOXC5Q00444 222 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 RAB41Q5JT25 222 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 TMEM184AQ6ZMB5 413 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 GPR149Q86SP6 731 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 ZNF300Q96RE9 604 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 POLHQ9Y253 713 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 RAB3DO95716 219 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 POU3F2P20265 443 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 GDF1P27539 372 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 PTPN6P29350 595 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 CLDN10P78369 228 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 ADARB1P78563 741 aaKnown RBP16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 SLC30A3Q99726 388 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 MROH6A6NGR9 719 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 MCCD1P59942 119 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 PTPRRQ15256 657 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 ELP2Q6IA86 826 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 MCATQ8IVS2 390 aaKnown RBP16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 FAM83FQ8NEG4 500 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 ZNF417Q8TAU3 575 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 DEDD2Q8WXF8 326 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 TOE1Q96GM8 510 aaKnown RBP16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 SENP5Q96HI0 755 aaPredicted RBP16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 OR10A5Q9H207 317 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 OR10A2Q9H208 303 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 PLEK2Q9NYT0 353 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 TMEM181Q9P2C4 612 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 CACNG2Q9Y698 323 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 AP1M2Q9Y6Q5 423 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 NALCNQ8IZF0 1738 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 GABRR3A8MPY1 467 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 CASC3O15234 703 aaKnown RBP16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 SPDEFO95238 335 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 PAHP00439 452 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 ZNF136P52737 540 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 MEX3BQ6ZN04 569 aaKnown RBP16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 STK35Q8TDR2 534 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 RTP3Q9BQQ7 232 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 ACPTQ9BZG2 426 aa16.89■□□□□ 0.29
ARHGEF28-203ENST00000426542 CNMDO75829 334 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 IFNA10P01566 189 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 TFP02787 698 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 HMGN2P05204 90 aaKnown RBP16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 CSNK1A1P48729 337 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 DTD2Q96FN9 168 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 INTS14Q96SY0 518 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 CDCA3Q99618 268 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 USB1Q9BQ65 265 aaKnown RBP16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 MCTS1Q9ULC4 181 aaKnown RBP16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 SLC35A3Q9Y2D2 325 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 ADAMTS4O75173 837 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 PRDX3P30048 256 aaKnown RBP16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 GK2Q14410 553 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 MORN1Q5T089 497 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 PARS2Q7L3T8 475 aaKnown RBP16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 OR4D6Q8NGJ1 314 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 C22orf15Q8WYQ4 148 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 MMP28Q9H239 520 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 HAO2Q9NYQ3 351 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 TRAV27A0A087WT01 109 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 SETD1AO15047 1707 aaKnown RBP16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 TSPAN15O95858 294 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 CD53P19397 219 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 B3GNT7Q8NFL0 401 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 OR14K1Q8NGZ2 314 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 CASD1Q96PB1 797 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 ZFP57Q9NU63 452 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 DCAF13Q9NV06 445 aaKnown RBP16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 TRBV11-1A0A0K0K1C0 115 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 PTTG1O95997 202 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 GPR139Q6DWJ6 353 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 FAM43BQ6ZT52 329 aaPredicted RBP16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 SERPINA12Q8IW75 414 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 BORCS7Q96B45 105 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 TXNDC15Q96J42 360 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 CHRDQ9H2X0 955 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 INIPQ9NRY2 104 aa16.88■□□□□ 0.29
ARHGEF28-203ENST00000426542 PRSS38A1L453 326 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms