RNA–Protein interactions for RNA: ENST00000425660.5

ACTB-204, Transcript of actin beta, humanhuman

TSL 1 (best)

Gene ACTB, Length 1,845 nt, Biotype nonsense mediated decay, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-204ENST00000425660 NKAIN4Q8IVV8 208 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 LSMEM1Q8N8F7 131 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 PRSS33Q8NF86 280 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 CNOT9Q92600 299 aaKnown RBP14.01□□□□□ -0.17
ACTB-204ENST00000425660 RNF31Q96EP0 1072 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 LMF1Q96S06 567 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 CMKLR1Q99788 373 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 WWTR1Q9GZV5 400 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 ADNPQ9H2P0 1102 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 UBQLN4Q9NRR5 601 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 MRTO4Q9UKD2 239 aaKnown RBP14.01□□□□□ -0.17
ACTB-204ENST00000425660 SAGE2PA6NJ88 616 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 ADAM11O75078 769 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 WBP4O75554 376 aaKnown RBP14.01□□□□□ -0.17
ACTB-204ENST00000425660 LYPD3O95274 346 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 ANGPTL1O95841 491 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 LINGO3P0C6S8 592 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 ZNF28P17035 718 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 GSTM3P21266 225 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 ACAA2P42765 397 aaKnown RBP14.01□□□□□ -0.17
ACTB-204ENST00000425660 OMPP47874 163 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 ALDH3B2P48448 385 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 TCF15Q12870 199 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 OR1Q1Q15612 314 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 TMEM205Q6UW68 189 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 MBOAT2Q6ZWT7 520 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 SLCO6A1Q86UG4 719 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 SATL1Q86VE3 508 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 DEPDC4Q8N2C3 294 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 APCDD1LQ8NCL9 501 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 FAM71CQ8NEG0 241 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 NFAM1Q8NET5 270 aaPredicted RBP14.01□□□□□ -0.17
ACTB-204ENST00000425660 RHOXF1Q8NHV9 184 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 APH1BQ8WW43 257 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 GPA33Q99795 319 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 PRSS27Q9BQR3 290 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 ZNF559Q9BR84 538 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 FAM86C1Q9NVL1 165 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 NXT1Q9UKK6 140 aaKnown RBP14.01□□□□□ -0.17
ACTB-204ENST00000425660 SLC7A7Q9UM01 511 aa14.01□□□□□ -0.17
ACTB-204ENST00000425660 SMIM31A0A1B0GVY4 71 aa14□□□□□ -0.17
ACTB-204ENST00000425660 SERINC4A6NH21 518 aa14□□□□□ -0.17
ACTB-204ENST00000425660 GABRB1P18505 474 aa14□□□□□ -0.17
ACTB-204ENST00000425660 GSSP48637 474 aa14□□□□□ -0.17
ACTB-204ENST00000425660 EMP2P54851 167 aa14□□□□□ -0.17
ACTB-204ENST00000425660 NADK2Q4G0N4 442 aa14□□□□□ -0.17
ACTB-204ENST00000425660 FNDC7Q5VTL7 733 aa14□□□□□ -0.17
ACTB-204ENST00000425660 ZNF773Q6PK81 442 aa14□□□□□ -0.17
ACTB-204ENST00000425660 ZNF730Q6ZMV8 503 aa14□□□□□ -0.17
ACTB-204ENST00000425660 SLC29A4Q7RTT9 530 aa14□□□□□ -0.17
ACTB-204ENST00000425660 ZNF614Q8N883 585 aa14□□□□□ -0.17
ACTB-204ENST00000425660 B3GNT7Q8NFL0 401 aa14□□□□□ -0.17
ACTB-204ENST00000425660 FAM81AQ8TBF8 368 aa14□□□□□ -0.17
ACTB-204ENST00000425660 METTL21AQ8WXB1 218 aa14□□□□□ -0.17
ACTB-204ENST00000425660 UBE2FQ969M7 185 aa14□□□□□ -0.17
ACTB-204ENST00000425660 EFHD2Q96C19 240 aaPredicted RBP14□□□□□ -0.17
ACTB-204ENST00000425660 WDR77Q9BQA1 342 aaPredicted RBP14□□□□□ -0.17
ACTB-204ENST00000425660 EDEM2Q9BV94 578 aa14□□□□□ -0.17
ACTB-204ENST00000425660 AKIRIN1Q9H9L7 192 aaPredicted RBP14□□□□□ -0.17
ACTB-204ENST00000425660 NDUFA13Q9P0J0 144 aa14□□□□□ -0.17
ACTB-204ENST00000425660 RNF6Q9Y252 685 aa14□□□□□ -0.17
ACTB-204ENST00000425660 SLC35A3Q9Y2D2 325 aa14□□□□□ -0.17
ACTB-204ENST00000425660 KLF4O43474 513 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 PRKNO60260 465 aaPredicted RBP13.99□□□□□ -0.17
ACTB-204ENST00000425660 SLC5A2P31639 672 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 CSNK2BP67870 215 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 TSPAN31Q12999 210 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 FAAH2Q6GMR7 532 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 ZNF550Q7Z398 422 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 RNF113BQ8IZP6 322 aaKnown RBP13.99□□□□□ -0.17
ACTB-204ENST00000425660 NLGN4XQ8N0W4 816 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 ZNF527Q8NB42 609 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 TMEM255BQ8WV15 326 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 HSPBAP1Q96EW2 488 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 GAL3ST4Q96RP7 486 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 DUSP21Q9H596 190 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 TMEM9BQ9NQ34 198 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 AKAP7Q9P0M2 348 aaPredicted RBP13.99□□□□□ -0.17
ACTB-204ENST00000425660 ZNF223Q9UK11 482 aaPredicted RBP13.99□□□□□ -0.17
ACTB-204ENST00000425660 A0A0B4J2E0 115 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 A0A1B0GX12 115 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 KLK3P07288 261 aaPredicted RBP13.99□□□□□ -0.17
ACTB-204ENST00000425660 TBXA2RP21731 343 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 FPR3P25089 353 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 IDH2P48735 452 aaKnown RBP13.99□□□□□ -0.17
ACTB-204ENST00000425660 RNF144AP50876 292 aaPredicted RBP13.99□□□□□ -0.17
ACTB-204ENST00000425660 CDC42P60953 191 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 SLC35A2P78381 396 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 E2F1Q01094 437 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 SLX4IPQ5VYV7 408 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 HLA-DQA1Q5Y7H0 255 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 RRM2BQ7LG56 351 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 PRICKLE2Q7Z3G6 844 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 PIGXQ8TBF5 258 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 GNPDA2Q8TDQ7 276 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 PMEPA1Q969W9 287 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 TP53INP1Q96A56 240 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 CRB3Q9BUF7 120 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 ZNF426Q9BUY5 554 aa13.99□□□□□ -0.17
ACTB-204ENST00000425660 ULBP3Q9BZM4 244 aa13.99□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms