RNA–Protein interactions for RNA: ENST00000422379.2

HPS4-204, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 1,942 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-204ENST00000422379 VMP1Q96GC9 406 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 LCORQ96JN0 433 aaPredicted RBP8.25□□□□□ -1.09
HPS4-204ENST00000422379 TSC22D3Q99576 134 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 EPYCQ99645 322 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 KLHDC3Q9BQ90 382 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 PRR14Q9BWN1 585 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 GPR87Q9BY21 358 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 ING2Q9H160 280 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 THSD1Q9NS62 852 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 P4HTMQ9NXG6 502 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 COPS7AQ9UBW8 275 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 PRODH2Q9UF12 536 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 CBLCQ9ULV8 474 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 LIPT1Q9Y234 373 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 WDR45Q9Y484 360 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 TESMINQ9Y4I5 508 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 ORC6Q9Y5N6 252 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 A0A0G2JPF8 293 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 LOC100130705A0A1B0GUX0 176 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 AGAP5A6NIR3 686 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 HNRNPCL2B2RXH8 293 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 B4DXG7 233 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 HNRNPCL3B7ZW38 293 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 C5orf58C9J3I9 102 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 WWP2O00308 870 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 SLC16A6O15403 523 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 EFSO43281 561 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 TLX3O43711 291 aaPredicted RBP8.25□□□□□ -1.09
HPS4-204ENST00000422379 DYRK3O43781 588 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 TPST2O60704 377 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 ADAM11O75078 769 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 HNRNPCL4P0DMR1 293 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 ITGAMP11215 1152 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 ETS2P15036 469 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 IL7RP16871 459 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 CD82P27701 267 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 CALRP27797 417 aaKnown RBP8.25□□□□□ -1.09
HPS4-204ENST00000422379 ABCD3P28288 659 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 KCNJ5P48544 419 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 TPD52P55327 224 aaPredicted RBP8.25□□□□□ -1.09
HPS4-204ENST00000422379 SSPNQ14714 243 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 NPTX1Q15818 432 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 ATAD3BQ5T9A4 648 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 ZNF691Q5VV52 312 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 PLAG1Q6DJT9 500 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 TCTN3Q6NUS6 607 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 FAHD1Q6P587 224 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 LYPD8Q6UX82 237 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 NDUFAF7Q7L592 441 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 ARMC8Q8IUR7 673 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 PIK3C3Q8NEB9 887 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 BBS10Q8TAM1 723 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 GEMIN6Q8WXD5 167 aaKnown RBP8.25□□□□□ -1.09
HPS4-204ENST00000422379 TMIGD2Q96BF3 282 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 ZNF300Q96RE9 604 aaPredicted RBP8.25□□□□□ -1.09
HPS4-204ENST00000422379 YTHDF1Q9BYJ9 559 aaKnown RBP8.25□□□□□ -1.09
HPS4-204ENST00000422379 EXD2Q9NVH0 621 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 TUBA8Q9NY65 449 aaPredicted RBP8.25□□□□□ -1.09
HPS4-204ENST00000422379 KIF17Q9P2E2 1029 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 C19orf25Q9UFG5 118 aaPredicted RBP8.25□□□□□ -1.09
HPS4-204ENST00000422379 KCND3Q9UK17 655 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 SH3GLB1Q9Y371 365 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 HRH3Q9Y5N1 445 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 LYVE1Q9Y5Y7 322 aa8.25□□□□□ -1.09
HPS4-204ENST00000422379 NSG1A0A0A6YYJ2 146 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 OR6C76A6NM76 312 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 J3KTA2 159 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 M0R3H8 397 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 BCKDKO14874 412 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 TO15178 435 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 ADAMDEC1O15204 470 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 OIP5O43482 229 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 TSPAN2O60636 221 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 STX11O75558 287 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 FESP07332 822 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 LIPCP11150 499 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 CYP4B1P13584 511 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 EEF1A1P68104 462 aaKnown RBP8.24□□□□□ -1.09
HPS4-204ENST00000422379 HOXC5Q00444 222 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 IL1RL1Q01638 556 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 CD47Q08722 323 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 ZNHIT3Q15649 155 aaPredicted RBP8.24□□□□□ -1.09
HPS4-204ENST00000422379 CTU2Q2VPK5 515 aaKnown RBP8.24□□□□□ -1.09
HPS4-204ENST00000422379 NDUFAF6Q330K2 333 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 TBC1D25Q3MII6 688 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 PRAMEF8Q5VWM4 474 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 PRAMEF7Q5VXH5 474 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 LAIR2Q6ISS4 152 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 ZNF836Q6ZNA1 936 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 ZNF619Q8N2I2 560 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 ATG16L2Q8NAA4 619 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 PSMF1Q92530 271 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 ZNF524Q96C55 264 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 DGCR14Q96DF8 476 aaKnown RBP8.24□□□□□ -1.09
HPS4-204ENST00000422379 ART5Q96L15 291 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 ZNF347Q96SE7 839 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 ADOQ96SZ5 270 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 RIBC2Q9H4K1 309 aa8.24□□□□□ -1.09
HPS4-204ENST00000422379 GPN2Q9H9Y4 310 aaPredicted RBP8.24□□□□□ -1.09
HPS4-204ENST00000422379 Q9N2J8 555 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms