RNA–Protein interactions for RNA: ENST00000421223.5

DDX56-203, Transcript of DEAD-box helicase 56, humanhuman

TSL 2

Gene DDX56, Length 3,028 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-203ENST00000421223 A0A0G2JNG1 304 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 KIR2DS3K7RE56 304 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 MED26O95402 600 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 SCG5P05408 212 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 MYF5P13349 255 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 MAOAP21397 527 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 TGM1P22735 817 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 SOX18P35713 384 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 SLC9A3P48764 834 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 UBE2IP63279 158 aaKnown RBP10.17□□□□□ -0.78
DDX56-203ENST00000421223 KIR2DS5Q14953 304 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 AMZ1Q400G9 498 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 TDHQ8IZJ6 230 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 ZNF619Q8N2I2 560 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 LINC00471Q8N535 108 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 PARP16Q8N5Y8 322 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 SYT14Q8NB59 555 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 CYB561A3Q8NBI2 242 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 WSB2Q9NYS7 404 aaPredicted RBP10.17□□□□□ -0.78
DDX56-203ENST00000421223 OR10H1Q9Y4A9 318 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 KLK4Q9Y5K2 254 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 VPS13AQ96RL7 3174 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 LOC110117498-PIK3R3F6TDL0 507 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 PRODHO43272 600 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 REM1O75628 298 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 SLITRK5O94991 958 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 MRPL3P09001 348 aaKnown RBP10.17□□□□□ -0.78
DDX56-203ENST00000421223 BMP7P18075 431 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 CELP19835 753 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 NOS3P29474 1203 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 GFERP55789 205 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 RUNX1T1Q06455 604 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 INSL4Q14641 139 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 KCNAB1Q14722 419 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 OCLNQ16625 522 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 KLHL22Q53GT1 634 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 MEDAGQ5VYS4 303 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 WDR88Q6ZMY6 472 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 PHC2Q8IXK0 858 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 CDRT4Q8N9R6 151 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 MINDY2Q8NBR6 621 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 RIT1Q92963 219 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 SPACA7Q96KW9 195 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 SECISBP2Q96T21 854 aaKnown RBP10.17□□□□□ -0.78
DDX56-203ENST00000421223 IFT27Q9BW83 186 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 HDHD5Q9BXW7 423 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 FOXQ1Q9C009 403 aa10.17□□□□□ -0.78
DDX56-203ENST00000421223 CNTRLQ7Z7A1 2325 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 A0A1W2PPC4 97 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 SNTNA6NMZ2 147 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 A8MU76 341 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 SNX4O95219 450 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 AGR2O95994 175 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 GYPBP06028 91 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 HTR2AP28223 471 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 UGT2B10P36537 528 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 BLKP51451 505 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 CEBPEQ15744 281 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 PRICKLE4Q2TBC4 344 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 PRAMEF17Q5VTA0 474 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 HEPHL1Q6MZM0 1159 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 RASSF6Q6ZTQ3 369 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 PROKR2Q8NFJ6 384 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 OR13C2Q8NGS9 318 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 OSTF1Q92882 214 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 CFL2Q9Y281 166 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 SHISA7A6NL88 538 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 OR5K4A6NMS3 321 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 MAKP20794 623 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 CCR4P51679 360 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 ZNF136P52737 540 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 RPS25P62851 125 aaKnown RBP10.16□□□□□ -0.78
DDX56-203ENST00000421223 RHAGQ02094 409 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 TEKQ02763 1124 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 GAS6Q14393 721 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 CCDC92Q53HC0 331 aaPredicted RBP10.16□□□□□ -0.78
DDX56-203ENST00000421223 STEAP3Q658P3 488 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 MBOAT2Q6ZWT7 520 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 CDK20Q8IZL9 346 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 UBE2J2Q8N2K1 259 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 ARL14Q8N4G2 192 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 C19orf47Q8N9M1 422 aaKnown RBP10.16□□□□□ -0.78
DDX56-203ENST00000421223 NLGN4YQ8NFZ3 816 aaPredicted RBP10.16□□□□□ -0.78
DDX56-203ENST00000421223 OR2T33Q8NG76 320 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 TMEM239Q8WW34 195 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 TM9SF4Q92544 642 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 ANKRD9Q96BM1 317 aaPredicted RBP10.16□□□□□ -0.78
DDX56-203ENST00000421223 ITPKCQ96DU7 683 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 NELL2Q99435 816 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 OR52D1Q9H346 318 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 INIPQ9NRY2 104 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 SACM1LQ9NTJ5 587 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 DTX4Q9Y2E6 619 aa10.16□□□□□ -0.78
DDX56-203ENST00000421223 CACNA1CQ13936 2221 aa10.15□□□□□ -0.78
DDX56-203ENST00000421223 TRAPPC13A5PLN9 417 aa10.15□□□□□ -0.78
DDX56-203ENST00000421223 DBIP07108 87 aaKnown RBP10.15□□□□□ -0.78
DDX56-203ENST00000421223 PIPP12273 146 aaPredicted RBP10.15□□□□□ -0.78
DDX56-203ENST00000421223 PAICSP22234 425 aaKnown RBP10.15□□□□□ -0.78
DDX56-203ENST00000421223 ARFIP1P53367 373 aa10.15□□□□□ -0.78
DDX56-203ENST00000421223 HNRNPA0Q13151 305 aaKnown RBP10.15□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms