RNA–Protein interactions for RNA: ENST00000418660.1

LINC00404-201, long intergenic non-protein coding RNA 404, humanhuman

TSL 2 BASIC

Gene LINC00404, Length 428 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00404-201ENST00000418660 ZZZ3Q8IYH5 903 aa14.85□□□□□ -0.03
LINC00404-201ENST00000418660 GCNT2Q8N0V5 402 aa14.85□□□□□ -0.03
LINC00404-201ENST00000418660 ZNF527Q8NB42 609 aa14.85□□□□□ -0.03
LINC00404-201ENST00000418660 VPS37AQ8NEZ2 397 aa14.85□□□□□ -0.03
LINC00404-201ENST00000418660 RAB3IL1Q8TBN0 382 aa14.85□□□□□ -0.03
LINC00404-201ENST00000418660 PIGMQ9H3S5 423 aa14.85□□□□□ -0.03
LINC00404-201ENST00000418660 NKIRAS1Q9NYS0 192 aa14.85□□□□□ -0.03
LINC00404-201ENST00000418660 PDZD2O15018 2839 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 RNF103-CHMP3A0A140T963 221 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 C7orf72A4D263 438 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 SHISA8B8ZZ34 492 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 H0YC42 278 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 SDHDO14521 159 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 HDAC3O15379 428 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 MATN1P21941 496 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 ATP12AP54707 1039 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 TPD52P55327 224 aaPredicted RBP14.84□□□□□ -0.03
LINC00404-201ENST00000418660 RPS3AP61247 264 aaKnown RBP14.84□□□□□ -0.03
LINC00404-201ENST00000418660 PHC1P78364 1004 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 SORDQ00796 357 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 DPY19L1Q2PZI1 675 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 FLYWCH1Q4VC44 716 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 KLHL26Q53HC5 615 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 SPATA19Q7Z5L4 167 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 TMEM200AQ86VY9 491 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 GTPBP8Q8N3Z3 284 aaPredicted RBP14.84□□□□□ -0.03
LINC00404-201ENST00000418660 METTL25Q8N6Q8 603 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 OR5D16Q8NGK9 328 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 OR4A15Q8NGL6 344 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 B4GALNT2Q8NHY0 566 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 PHOSPHO1Q8TCT1 267 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 FAM222BQ8WU58 562 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 SMPDL3BQ92485 455 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 ZBTB8AQ96BR9 441 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 SH3YL1Q96HL8 342 aaPredicted RBP14.84□□□□□ -0.03
LINC00404-201ENST00000418660 MANSC1Q9H8J5 431 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 MED17Q9NVC6 651 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 CRIM1Q9NZV1 1036 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 ZNF175Q9Y473 711 aa14.84□□□□□ -0.03
LINC00404-201ENST00000418660 TNFSF12-TNFSF13A0A0A6YY99 330 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 NPIPA5A0A0B4J1W7 369 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 A0A1W2PNV4 684 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 TRPC5OSA6NMA1 111 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 NPIPA7E9PJI5 369 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 NPIPB9F8W1W9 429 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 SLCO1B7G3V0H7 640 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 H3BNH8 94 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 TNFSF13O75888 250 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 CPSF4O95639 269 aaKnown RBP14.83□□□□□ -0.04
LINC00404-201ENST00000418660 AK1P00568 194 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 ALDOCP09972 364 aaKnown RBP14.83□□□□□ -0.04
LINC00404-201ENST00000418660 NPIPA8P0DM63 369 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 PSMA4P25789 261 aaKnown RBP14.83□□□□□ -0.04
LINC00404-201ENST00000418660 ZNF41P51814 821 aaPredicted RBP14.83□□□□□ -0.04
LINC00404-201ENST00000418660 RPS26P62854 115 aaKnown RBP14.83□□□□□ -0.04
LINC00404-201ENST00000418660 CASP8Q14790 479 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 PLPPR5Q32ZL2 321 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 SPANXN4Q5MJ08 99 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 CDH24Q86UP0 819 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 GGNQ86UU5 652 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 ANKRD46Q86W74 232 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 WDR75Q8IWA0 830 aaKnown RBP14.83□□□□□ -0.04
LINC00404-201ENST00000418660 CLEC4FQ8N1N0 589 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 CHDHQ8NE62 594 aaPredicted RBP14.83□□□□□ -0.04
LINC00404-201ENST00000418660 FIG4Q92562 907 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 SLC35G5Q96KT7 338 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 SDF2Q99470 211 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 RBM24Q9BX46 236 aaKnown RBP14.83□□□□□ -0.04
LINC00404-201ENST00000418660 PINK1Q9BXM7 581 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 SERHL2Q9H4I8 314 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 AIG1Q9NVV5 245 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 PACSIN3Q9UKS6 424 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 DOCK7Q96N67 2140 aa14.83□□□□□ -0.04
LINC00404-201ENST00000418660 DCHS2Q6V1P9 2916 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 TUBAL3A6NHL2 446 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 A8MXE2 369 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 E9PBE3 544 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 CTAG2O75638 210 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 UQCRC2P22695 453 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 S100A3P33764 101 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 RAC1P63000 192 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 ZNF117Q03924 483 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 SGCBQ16585 318 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 ARHGAP11BQ3KRB8 267 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 LUZP2Q86TE4 346 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 MIPOL1Q8TD10 442 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 ZNF845Q96IR2 970 aaPredicted RBP14.82□□□□□ -0.04
LINC00404-201ENST00000418660 RNF145Q96MT1 663 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 NPAS1Q99742 590 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 WDR55Q9H6Y2 383 aaPredicted RBP14.82□□□□□ -0.04
LINC00404-201ENST00000418660 RNF122Q9H9V4 155 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 MARCOQ9UEW3 520 aaPredicted RBP14.82□□□□□ -0.04
LINC00404-201ENST00000418660 DTNAQ9Y4J8 743 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 CSMD1Q96PZ7 3565 aa14.82□□□□□ -0.04
LINC00404-201ENST00000418660 GOLGA8QA0A0J9YX86 632 aa14.81□□□□□ -0.04
LINC00404-201ENST00000418660 FAM221AA4D161 298 aa14.81□□□□□ -0.04
LINC00404-201ENST00000418660 GOLGA8OA6NCC3 632 aa14.81□□□□□ -0.04
LINC00404-201ENST00000418660 GOLGA8NF8WBI6 632 aa14.81□□□□□ -0.04
LINC00404-201ENST00000418660 GTPBP1O00178 669 aaKnown RBP14.81□□□□□ -0.04
LINC00404-201ENST00000418660 EIF1AYO14602 144 aaKnown RBP14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms