RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 WDR88Q6ZMY6 472 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 CCDC81Q6ZN84 652 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 NRMQ8IXM6 262 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 SLC43A2Q8N370 569 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 STX19Q8N4C7 294 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 IQCF1Q8N6M8 205 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 TCEANCQ8N8B7 351 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 LSMEM1Q8N8F7 131 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 RCBTB1Q8NDN9 531 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 MAFAQ8NHW3 353 aaPredicted RBP8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 TBC1D15Q8TC07 691 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 TMEM163Q8TC26 289 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 SAP25Q8TEE9 199 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 CNOT9Q92600 299 aaKnown RBP8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 OSTF1Q92882 214 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 CCDC74AQ96AQ1 378 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 FAM46AQ96IP4 442 aaKnown RBP8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 HS6ST2Q96MM7 605 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 SLC46A1Q96NT5 459 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 DACH2Q96NX9 599 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 CCNL2Q96S94 520 aaPredicted RBP8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 DPYSL5Q9BPU6 564 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 DCUN1D5Q9BTE7 237 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 TSSK6Q9BXA6 273 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 TRIM2Q9C040 744 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 DSN1Q9H410 356 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 AMBNQ9NP70 447 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 ST6GALNAC1Q9NSC7 600 aaPredicted RBP8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 IRAK4Q9NWZ3 460 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 DNAJC27Q9NZQ0 273 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 SELENONQ9NZV5 590 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 SLC7A7Q9UM01 511 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 SRPK3Q9UPE1 567 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 CFL2Q9Y281 166 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 RPL36Q9Y3U8 105 aaKnown RBP8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 NCOR1O75376 2440 aa8.37□□□□□ -1.07
LINCMD1-201ENST00000418518 ZDBF2Q9HCK1 2354 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 IGLV3-12A0A075B6K2 115 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 A0A1B0GX78 115 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 IRGMA1A4Y4 181 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 PRODHO43272 600 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 PIP5K1CO60331 668 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 MAN1A2O60476 641 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 CDC123O75794 336 aaPredicted RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 DDAH2O95865 285 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 ONECUT2O95948 504 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 GKN3PP0CG01 181 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 ZNF182P17025 639 aaPredicted RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 FBLP22087 321 aaKnown RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 GRK5P34947 590 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 LIPAP38571 399 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 PPICP45877 212 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 DHPSP49366 369 aaPredicted RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 ARL4DP49703 201 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 SEPHS1P49903 392 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 SLC37A1P57057 533 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 MLLT1Q03111 559 aaPredicted RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 SIGLEC14Q08ET2 396 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 SRSF5Q13243 272 aaKnown RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 NR0B2Q15466 257 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 ELAVL1Q15717 326 aaKnown RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 CLPPQ16740 277 aaPredicted RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 TIGD6Q17RP2 521 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 PGGHGQ32M88 737 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 AMZ1Q400G9 498 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 MINDY4Q4G0A6 757 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 C3orf38Q5JPI3 329 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 PRPF38BQ5VTL8 546 aaKnown RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 RPL13AP3Q6NVV1 102 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 TSSK4Q6SA08 328 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 LINC00114Q6XXX2 140 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 TTLL10Q6ZVT0 673 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 TMPRSS11FQ6ZWK6 438 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 RRM2BQ7LG56 351 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 ZNF550Q7Z398 422 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 ARHGAP22Q7Z5H3 698 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 ZNF440Q8IYI8 595 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 GPR135Q8IZ08 494 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 MAML2Q8IZL2 1156 aaPredicted RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 METTL27Q8N6F8 245 aaPredicted RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 BCORP1Q8N888 145 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 PLPP5Q8NEB5 264 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 OR4N2Q8NGD1 307 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 PTPMT1Q8WUK0 201 aaPredicted RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 TMEM255BQ8WV15 326 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 TMEM239Q8WW34 195 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 TMEM80Q96HE8 168 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 ZC3H10Q96K80 434 aaKnown RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 ART5Q96L15 291 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 ZNF582Q96NG8 517 aaPredicted RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 SLC38A2Q96QD8 506 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 IL4I1Q96RQ9 567 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 NUDT22Q9BRQ3 303 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 NDC1Q9BTX1 674 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 CNPPD1Q9BV87 410 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 TAPBPLQ9BX59 468 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 TGIF2Q9GZN2 237 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 EGLN3Q9H6Z9 239 aa8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 FGF20Q9NP95 211 aaPredicted RBP8.36□□□□□ -1.07
LINCMD1-201ENST00000418518 MKKSQ9NPJ1 570 aaPredicted RBP8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms