RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 IL2RAP01589 272 aa16.27■□□□□ 0.2
VCP-202ENST00000417448 IGKV1D-16P01601 117 aa16.27■□□□□ 0.2
VCP-202ENST00000417448 DDX5P17844 614 aaKnown RBP16.27■□□□□ 0.2
VCP-202ENST00000417448 POLR2JP52435 117 aaKnown RBP16.27■□□□□ 0.2
VCP-202ENST00000417448 CRYZQ08257 329 aaKnown RBP16.27■□□□□ 0.2
VCP-202ENST00000417448 DUSP5Q16690 384 aa16.27■□□□□ 0.2
VCP-202ENST00000417448 MFSD12Q6NUT3 480 aa16.27■□□□□ 0.2
VCP-202ENST00000417448 C17orf47Q8NEP4 570 aa16.27■□□□□ 0.2
VCP-202ENST00000417448 GPR151Q8TDV0 419 aa16.27■□□□□ 0.2
VCP-202ENST00000417448 PAQR8Q8TEZ7 354 aa16.27■□□□□ 0.2
VCP-202ENST00000417448 PIGTQ969N2 578 aa16.27■□□□□ 0.2
VCP-202ENST00000417448 JSRP1Q96MG2 331 aaPredicted RBP16.27■□□□□ 0.2
VCP-202ENST00000417448 LMF2Q9BU23 707 aaKnown RBP16.27■□□□□ 0.2
VCP-202ENST00000417448 SDR39U1Q9NRG7 319 aaPredicted RBP16.27■□□□□ 0.2
VCP-202ENST00000417448 SLC6A13Q9NSD5 602 aa16.27■□□□□ 0.2
VCP-202ENST00000417448 NTMQ9P121 344 aa16.27■□□□□ 0.2
VCP-202ENST00000417448 MAPRE3Q9UPY8 281 aa16.27■□□□□ 0.2
VCP-202ENST00000417448 SH3D21A4FU49 640 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 RNASET2O00584 256 aaKnown RBP16.26■□□□□ 0.19
VCP-202ENST00000417448 ACOX3O15254 700 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 SIAH2O43255 324 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 TSPAN2O60636 221 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 PGRP06401 933 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 CYP4B1P13584 511 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 TIGD2Q4W5G0 525 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 CCNJQ5T5M9 372 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 ANXA8L1Q5VT79 327 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 FIGNL1Q6PIW4 674 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 DNAJC14Q6Y2X3 702 aaPredicted RBP16.26■□□□□ 0.19
VCP-202ENST00000417448 OLIG3Q7RTU3 272 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 C6orf120Q7Z4R8 191 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 FUNDC1Q8IVP5 155 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 PSMA8Q8TAA3 256 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 SPPL2AQ8TCT8 520 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 CDS1Q92903 461 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 SLC35A4Q96G79 324 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 COL21A1Q96P44 957 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 MS4A4EQ96PG1 132 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 SERHL2Q9H4I8 314 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 CCDC134Q9H6E4 229 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 GALNT9Q9HCQ5 603 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 ZFP64Q9NPA5 681 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 GPATCH2Q9NW75 528 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 ZIM2Q9NZV7 527 aa16.26■□□□□ 0.19
VCP-202ENST00000417448 C15orf38-AP3S2A0A0A6YYH1 394 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 RNF103-CHMP3A0A140T963 221 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 TP53I11O14683 189 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 CNOT4O95628 575 aaKnown RBP16.25■□□□□ 0.19
VCP-202ENST00000417448 BMP7P18075 431 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 MAP3K8P41279 467 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 CASP3P42574 277 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 RNF144AP50876 292 aaPredicted RBP16.25■□□□□ 0.19
VCP-202ENST00000417448 SEC24CP53992 1094 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 STX1BP61266 288 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 KCNJ2P63252 427 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 PRR5P85299 388 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 ZNHIT3Q15649 155 aaPredicted RBP16.25■□□□□ 0.19
VCP-202ENST00000417448 AGKQ53H12 422 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 NSUN5P2Q63ZY6 315 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 HMBOX1Q6NT76 420 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 ZAR1Q86SH2 424 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 NATD1Q8N6N6 113 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 OR5D16Q8NGK9 328 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 ZNF317Q96PQ6 595 aaPredicted RBP16.25■□□□□ 0.19
VCP-202ENST00000417448 TIMP4Q99727 224 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 RABEP2Q9H5N1 569 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 GALNT8Q9NY28 637 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 CCDC167Q9P0B6 97 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 PCDHGB4Q9UN71 923 aa16.25■□□□□ 0.19
VCP-202ENST00000417448 MBD3L3A6NE82 208 aaPredicted RBP16.24■□□□□ 0.19
VCP-202ENST00000417448 CAPN14A8MX76 684 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 NR5A2O00482 541 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 GNB5O14775 395 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 NKX2-2O95096 273 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 ALOX5P09917 674 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 TROVE2P10155 538 aaKnown RBP eCLIP16.24■□□□□ 0.19
VCP-202ENST00000417448 NID1P14543 1247 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 CTSSP25774 331 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 IL12BP29460 328 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 PTGDSP41222 190 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 ARFIP2P53365 341 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 GTDC1Q4AE62 458 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 SLC2A7Q6PXP3 512 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 ZNF621Q6ZSS3 439 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 NUP54Q7Z3B4 507 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 CDRT4Q8N9R6 151 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 VPS37AQ8NEZ2 397 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 OR56A1Q8NGH5 318 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 MBD3L2Q8NHZ7 208 aaPredicted RBP16.24■□□□□ 0.19
VCP-202ENST00000417448 CCDC115Q96NT0 180 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 CCL19Q99731 98 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 RBM24Q9BX46 236 aaKnown RBP16.24■□□□□ 0.19
VCP-202ENST00000417448 PRDM14Q9GZV8 571 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 METTL7AQ9H8H3 244 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 Q9N2J8 555 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 SERHLQ9NQF3 203 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 FAM120CQ9NX05 1096 aaKnown RBP16.24■□□□□ 0.19
VCP-202ENST00000417448 QPCTLQ9NXS2 382 aa16.24■□□□□ 0.19
VCP-202ENST00000417448 C6orf203Q9P0P8 240 aaPredicted RBP16.24■□□□□ 0.19
VCP-202ENST00000417448 BOKQ9UMX3 212 aaPredicted RBP16.24■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms