RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 POC1BQ8TC44 478 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 ACTRT2Q8TDY3 377 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 ZBTB8AQ96BR9 441 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 PPCDCQ96CD2 204 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 ZBED6CLQ96FA7 236 aaPredicted RBP13.25□□□□□ -0.29
RPS28-201ENST00000417088 GLRX2Q9NS18 164 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 BAIAP2L1Q9UHR4 511 aa13.25□□□□□ -0.29
RPS28-201ENST00000417088 TNFSF11O14788 317 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 CNOT4O95628 575 aaKnown RBP13.24□□□□□ -0.29
RPS28-201ENST00000417088 PAX1P15863 534 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 LCN1P31025 176 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 CRHR1P34998 444 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 CCT5P48643 541 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 ZNF41P51814 821 aaPredicted RBP13.24□□□□□ -0.29
RPS28-201ENST00000417088 PDE7AQ13946 482 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 CD226Q15762 336 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 RFTN2Q52LD8 501 aaPredicted RBP13.24□□□□□ -0.29
RPS28-201ENST00000417088 EXOSC6Q5RKV6 272 aaKnown RBP13.24□□□□□ -0.29
RPS28-201ENST00000417088 MFSD12Q6NUT3 480 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 BEND4Q6ZU67 534 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 ESPNLQ6ZVH7 1005 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 SZRD1Q7Z422 152 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 WFDC8Q8IUA0 241 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 CLHC1Q8NHS4 586 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 OSTF1Q92882 214 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 OTUB1Q96FW1 271 aaPredicted RBP13.24□□□□□ -0.29
RPS28-201ENST00000417088 PLPPR2Q96GM1 343 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 C16orf58Q96GQ5 468 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 SH3YL1Q96HL8 342 aaPredicted RBP13.24□□□□□ -0.29
RPS28-201ENST00000417088 MS4A4EQ96PG1 132 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 TSSK3Q96PN8 268 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 TMEM204Q9BSN7 226 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 ACTR6Q9GZN1 396 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 IQCGQ9H095 443 aaKnown RBP13.24□□□□□ -0.29
RPS28-201ENST00000417088 TUBB1Q9H4B7 451 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 TMEM185BQ9H7F4 350 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 UBQLN4Q9NRR5 601 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 ACSS1Q9NUB1 689 aaPredicted RBP13.24□□□□□ -0.29
RPS28-201ENST00000417088 ZNF701Q9NV72 531 aaPredicted RBP13.24□□□□□ -0.29
RPS28-201ENST00000417088 SH3BP4Q9P0V3 963 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 GPR52Q9Y2T5 361 aa13.24□□□□□ -0.29
RPS28-201ENST00000417088 A0A1W2PQD3 144 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 AZIN1O14977 448 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 SHBGP04278 402 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 ALOX5P09917 674 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 PSMB1P20618 241 aaKnown RBP13.23□□□□□ -0.29
RPS28-201ENST00000417088 ME2P23368 584 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 NR1H2P55055 460 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 CCNJQ5T5M9 372 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 LIPMQ5VYY2 423 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 HBMQ6B0K9 141 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 RNF165Q6ZSG1 346 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 MISPQ8IVT2 679 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 ZNF611Q8N823 705 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 COX18Q8N8Q8 333 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 CCDC63Q8NA47 563 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 B4GALNT2Q8NHY0 566 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 TMEM171Q8WVE6 324 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 RHOXF2Q9BQY4 288 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 OR10A4Q9H209 315 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 FANCFQ9NPI8 374 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 FIS1Q9Y3D6 152 aa13.23□□□□□ -0.29
RPS28-201ENST00000417088 KIAA1324LA8MWY0 1029 aaPredicted RBP13.22□□□□□ -0.29
RPS28-201ENST00000417088 SCDO00767 359 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 HS3ST1O14792 307 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 LSM1O15116 133 aaKnown RBP13.22□□□□□ -0.29
RPS28-201ENST00000417088 TMCC2O75069 709 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 TUBBP07437 444 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 LINGO3P0C6S8 592 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 LINC00032P0C843 101 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 NEFHP12036 1026 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 NID1P14543 1247 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 HPGDP15428 266 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 EFNA1P20827 205 aaPredicted RBP13.22□□□□□ -0.29
RPS28-201ENST00000417088 SHC1P29353 583 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 AGTR1P30556 359 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 SERPINB4P48594 390 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 PRIM2P49643 509 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 CARD18P57730 90 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 RPL38P63173 70 aaKnown RBP13.22□□□□□ -0.29
RPS28-201ENST00000417088 PDSS1Q5T2R2 415 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 GTF2IRD2BQ6EKJ0 949 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 ZCCHC12Q6PEW1 402 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 GTF2IRD2Q86UP8 949 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 STK32CQ86UX6 486 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 TRABD2AQ86V40 505 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 C10orf107Q8IVU9 208 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 GSPT2Q8IYD1 628 aaKnown RBP13.22□□□□□ -0.29
RPS28-201ENST00000417088 LILRA2Q8N149 483 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 CEP112Q8N8E3 955 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 ROBO4Q8WZ75 1007 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 KLHL15Q96M94 604 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 GATA5Q9BWX5 397 aaPredicted RBP13.22□□□□□ -0.29
RPS28-201ENST00000417088 C12orf49Q9H741 205 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 SIRT3Q9NTG7 399 aaPredicted RBP13.22□□□□□ -0.29
RPS28-201ENST00000417088 DNAJC15Q9Y5T4 150 aa13.22□□□□□ -0.29
RPS28-201ENST00000417088 INAFM1C9JVW0 142 aa13.21□□□□□ -0.29
RPS28-201ENST00000417088 COPEO14579 308 aa13.21□□□□□ -0.29
RPS28-201ENST00000417088 EFNA2O43921 213 aa13.21□□□□□ -0.29
RPS28-201ENST00000417088 BCKDHAP12694 445 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms