RNA–Protein interactions for RNA: ENST00000416295.1

SEMA3B-201, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 1,088 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-201ENST00000416295 GPR68Q15743 365 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 CD226Q15762 336 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 RAET1LQ5VY80 246 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 ZNF614Q8N883 585 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 RND1Q92730 232 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 WDYHV1Q96HA8 205 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 ZNF385DQ9H6B1 395 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 TPT1P8Q9HAU6 139 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 COQ3Q9NZJ6 369 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 FAM215AQ9Y5M1 114 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 DNAJC13O75165 2243 aa16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 DIDO1Q9BTC0 2240 aaKnown RBP16.33■□□□□ 0.2
SEMA3B-201ENST00000416295 A0A1W2PP18 115 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 DYNC1I1O14576 645 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 HCRTR2O43614 444 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 GMFGO60234 142 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 KIAA0513O60268 411 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 FCMRO60667 390 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 C1QCP02747 245 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 CPN1P15169 458 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 CAPN3P20807 821 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 TCEA1P23193 301 aaKnown RBP16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 ARFIP2P53365 341 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 PMPCAQ10713 525 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 FUT5Q11128 374 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 ZNF141Q15928 474 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 GPAT3Q53EU6 434 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 COX20Q5RI15 118 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 DCST1Q5T197 706 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 DDX59Q5T1V6 619 aaKnown RBP eCLIP16.32■□□□□ 0.28e-6■■■■■ 27.9
SEMA3B-201ENST00000416295 AP1ARQ63HQ0 302 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 HIST2H2BCQ6DN03 193 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 RTL6Q6ICC9 239 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 NCCRP1Q6ZVX7 275 aaPredicted RBP16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 ZNF619Q8N2I2 560 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 RPRMLQ8N4K4 120 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 MARVELD2Q8N4S9 558 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 B4GALNT2Q8NHY0 566 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 SH3YL1Q96HL8 342 aaPredicted RBP16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 TRNT1Q96Q11 434 aaKnown RBP16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 PIGQQ9BRB3 760 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 TTYH2Q9BSA4 534 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 PAIP1Q9H074 479 aaKnown RBP16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 SAP130Q9H0E3 1048 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 RAD21L1Q9H4I0 556 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 THUMPD1Q9NXG2 353 aaKnown RBP16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 MKLN1Q9UL63 735 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 PCDHB14Q9Y5E9 798 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 TEX15Q9BXT5 2789 aa16.32■□□□□ 0.2
SEMA3B-201ENST00000416295 GTPBP1O00178 669 aaKnown RBP16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 H6PDO95479 791 aa16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 CLDN1O95832 211 aa16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 UBL4AP11441 157 aa16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 CRATP43155 626 aa16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 ZNF41P51814 821 aaPredicted RBP16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 SUMO3P55854 103 aaPredicted RBP16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 NUP107P57740 925 aa16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 B3GALT5-AS1P59052 145 aa16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 ART3Q13508 389 aa16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 GTDC1Q4AE62 458 aa16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 ACSF3Q4G176 576 aaPredicted RBP16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 PDZK1Q5T2W1 519 aa16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 LRIF1Q5T3J3 769 aa16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 TYW3Q6IPR3 259 aaKnown RBP16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 CGB2Q6NT52 195 aa16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 ASB5Q8WWX0 329 aa16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 SDCCAG3Q96C92 435 aa16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 AURKBQ96GD4 344 aaPredicted RBP16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 SLC52A3Q9NQ40 469 aa16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 P2RX2Q9UBL9 471 aa16.31■□□□□ 0.2
SEMA3B-201ENST00000416295 MYO7BQ6PIF6 2116 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 SERINC4A6NH21 518 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 H0Y3Z8 333 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 CLIC1O00299 241 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 TNFRSF21O75509 655 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 UGT2B17O75795 530 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 GLI4P10075 376 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 NR2F1P10589 423 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 ZNF17P17021 662 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 PPIBP23284 216 aaKnown RBP16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 LHX2P50458 406 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 P2RX1P51575 399 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 MVDP53602 400 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 DSTNP60981 165 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 ZNF117Q03924 483 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 FADDQ13158 208 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 BCL2A1Q16548 175 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 ARSKQ6UWY0 536 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 FRRS1Q6ZNA5 592 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 LRRC74BQ6ZQY2 392 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 LACC1Q8IV20 430 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 ZPLD1Q8TCW7 415 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 TSPEARQ8WU66 669 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 ZBTB8AQ96BR9 441 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 ZNF317Q96PQ6 595 aaPredicted RBP16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 CALML5Q9NZT1 146 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 KLHL14Q9P2G3 628 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 STOML1Q9UBI4 398 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 VDAC3Q9Y277 283 aa16.3■□□□□ 0.2
SEMA3B-201ENST00000416295 CARD8Q9Y2G2 431 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.4 ms